Gene Information

Name : sgbU (BN424_1406)
Accession : YP_006992163.2
Strain : Carnobacterium maltaromaticum LMA28
Genome accession: NC_019425
Putative virulence/resistance : Unknown
Product : xylose isomerase-like TIM barrel family protein
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.3.22
Position : 1444801 - 1445664 bp
Length : 864 bp
Strand : +
Note : [G] COG3623 Putative L-xylulose-5-phosphate 3-epimerase

DNA sequence :
ATGAATACTTTAGGTATTTATGAAAAAGCCCTACCTAAAAATATCAGTTGGGAAGAGCGACTACAACTGGCGAAGTCATT
AGGTTTTGATTTTGTGGAAATGTCAATTGATGAAACGGATGAACGATTAGCTAGGCTAGATTGGTCAAAAAATAGTCGGA
ATGAAGTCAGCCAAGCAATTGTTAAAACTGGGGTTACGATTCAATCACTATGCTTAAGTGGACATAGACGTTACCCATTA
GGTTCAGTTGATCCTGTTATTCGTGAAAAAGGGCTGGAGATTATGGCAAAAGCAATTGATTTAGCCTCTGATTTAGGTAT
TCGAGTCATTCAATTAGCTGGTTATGATGTCTATTATGAGAAAAAATCAGTAGCAACACGAAGTTTTTTTATTGAAAATT
TAGAAAAATCAGTTGCTTTAGCTGCTAGAAAGCAAATAACCTTAGCAATTGAAATAATGGATGATTCTTTTATGTCGTCT
ATCACCAAATACAAACGTATCAAAAAACAAATTCCTTCACCGTGGCTACAAGTCTATCCTGATTTAGGTAATTTATCGGC
ATGGTCGGAAAATGATCCTGGTTATGAACTGGAACTTGGTAAGGGAGCCATCGTTGCCACTCATTTAAAAGATACGCTAG
CTGTTACGGATAATTTTTCAGGGAAATTTAAAGGCGTTCCTTTTGGCGAAGGATGCGTTGATTTCTTGGGATGCCTTAAG
ACAATGAAGTCTTTTTCTTATAATGGACCCTTTTTAATTGAAATGTGGTCCGAAGAGAGTTCGGATTTTAAGGAGGAAAT
CAAGGCTGCTAAGGCTTTTCTACTGCCAATATTAAAGGAGGCGGGTTTTAATTATGAATACTAA

Protein sequence :
MNTLGIYEKALPKNISWEERLQLAKSLGFDFVEMSIDETDERLARLDWSKNSRNEVSQAIVKTGVTIQSLCLSGHRRYPL
GSVDPVIREKGLEIMAKAIDLASDLGIRVIQLAGYDVYYEKKSVATRSFFIENLEKSVALAARKQITLAIEIMDDSFMSS
ITKYKRIKKQIPSPWLQVYPDLGNLSAWSENDPGYELELGKGAIVATHLKDTLAVTDNFSGKFKGVPFGEGCVDFLGCLK
TMKSFSYNGPFLIEMWSEESSDFKEEIKAAKAFLLPILKEAGFNYEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 3e-69 55