Gene Information

Name : ylmE (BN424_1197)
Accession : YP_006991954.2
Strain : Carnobacterium maltaromaticum LMA28
Genome accession: NC_019425
Putative virulence/resistance : Unknown
Product : alanine racemase, N-terminal domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1249733 - 1250404 bp
Length : 672 bp
Strand : +
Note : [R] COG0325 Predicted enzyme with a TIM-barrel fold

DNA sequence :
ATGACGATTAAAGAAAACTTACAACAAGTTGAAGAAACGCTTAATCTTTCTTTAACTCATGCCCAACGTCAACCAGAAGC
GGCAACATTAATTGCTGTTACTAAAGCTGTAAGTAATGAAGAAACAGCTGAAATCTATCATTTAGGGATAAAGAATTTAG
CTGAGAATCGGCCAGAAGGTTTGATTGCGAAACAAGATTTTTTACCTGAAAAAGATATTATTTGGCATTATATTGGTAAT
TTACAATCTAGAAAAGTCAAGCAAGTGATTAATCGAATTGACTATTTTCATAGCTTAGATCGTCTGACTTTAGCTAGTGA
GATTGAAAAGCGAGCAGATCATCAAATTGCGTGTTTTGTGCAAGTTAATGTTAGTAAAGAAGAGTCAAAGCATGGGATTT
CGCCAGTAGAATTAACAGAATTTATTGCTGAACTAGCGAATTACTCAAAGATTCAAGTGATTGGATTAATGACGATGGCG
CCATTAGGAGCCAATGAAGCTGAAATCAGACATTATTTTTCAGAGTTGCGCATTTTACAAGCAGAAATAGCCAGTAAAAA
AATTCCCTATGCTCCTTGTACTGAGTTGAGTATGGGAATGAGTAACGATTATCAATTGGCAGTAGAAGAAGGGGCCACTT
TTATCCGAGTCGGTTCACTATTGTTTAAATAA

Protein sequence :
MTIKENLQQVEETLNLSLTHAQRQPEAATLIAVTKAVSNEETAEIYHLGIKNLAENRPEGLIAKQDFLPEKDIIWHYIGN
LQSRKVKQVINRIDYFHSLDRLTLASEIEKRADHQIACFVQVNVSKEESKHGISPVELTEFIAELANYSKIQVIGLMTMA
PLGANEAEIRHYFSELRILQAEIASKKIPYAPCTELSMGMSNDYQLAVEEGATFIRVGSLLFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-33 43
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-33 43
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-33 43
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 1e-33 43