Gene Information

Name : B932_1721 (B932_1721)
Accession : YP_006984227.1
Strain : Gluconobacter oxydans H24
Genome accession: NC_019396
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease, ATP-binding subunit ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1748181 - 1750781 bp
Length : 2601 bp
Strand : +
Note : -

DNA sequence :
ATGGACATTCAGAAGTTTACGGAACGCAGCCAGGGTTTTTTGCAGGCTGCACAGACGATTGCCCTTCGGGATTACCACCA
GCAGTTGACGCCGGAGCATCTGCTCAAGGCCCTGCTGGATGACGAACAGGGCGCCGCGTCGGGCCTGATCCGGGCGGCAG
GTGGCGATCCAAAAGTTGTTCAGGCCGCCAATGATGCGGCGCTTGCCAAACTGCCAAAAGTTCAGGGCGGTGGTGCCGGT
CAGCCGCAGGCCACACCTGATTTCGTGCGTCTGTTGGACACCGCCGAAGCCGCAGCAAAGAACGCTGGTGACAGTCATGT
TGCGCAGGATCGACTGCTAGTGGCGATTGCTGCCAGCAATTCCCCGGCAGGCAAGGCTCTTGTTGAAGGCAAGGCTGATG
CCAGTGCGCTGGAGCGCGCTGTGGCTCAGATCCGCAAGGGTCGCACTGTGACCAGCGCATCTGCTGAAAACACGTTTGAT
GCATTGAAAAAATATGCTCGAGATGTGACCGCAGTGGCGCAGGCTGGCAAGCTTGATCCGGTTATTGGTCGTGATGAAGA
AATCCGCCGGGCCATCCAGGTTCTGGCGCGTCGAAGCAAGAACAATCCGGTTCTGATCGGTGAGCCGGGTGTGGGTAAAA
CCGCGATTGTTGAAGGTCTGGCCCTGCGTATCGTCAACGGCGACGTGCCCGAGGCTCTCCGCAACAAGAAGCTGATGTCG
CTCGACATGGGTGCCCTGATTGCCGGTGCGAAGTTCCGTGGTGAGTTTGAAGAACGTCTGAAGGCTGTTCTCAAGGAAGT
TGAGACCGCAGAAGGCGAAATCATTCTCTTCATTGACGAGATGCATACGCTGGTCGGCGCTGGCCGTTCCGATGGTGCGA
TGGATGCGTCCAACCTCATCAAGCCGGAACTGGCCCGCGGTACGCTTCACTGCATCGGTGCGACCACGCTCGATGAATAC
CGGAAGTACATTGAGAAGGACGCAGCTCTTGCCCGTCGCTTCCAGCCGGTTTTCGTCGGTGAGCCGTCCGTCGCGGATAC
GATTTCGATCCTGCGTGGCATCAAGGAGAAGTACGAGCTTCACCATGGTGTTCGCATCACGGATAATGCCATCGTTTCCG
CCGCAACGCTTTCCAACCGTTACATCACGGATCGCTTCCTGCCGGACAAGGCCATTGATCTGATCGACGAGGCTGCCAGC
CGTCTGCGGATGCAGATCGACAGCAAGCCGGAAGCTTTGGACGAACTTGATCGCCGTATCATTCAGCTGAAGATCGAGCG
TGAGGCCATCCGTAAGGAAGACGATACGGCGTCGAAGGATCGGCTGCAGGCTCTGGAAGCCGAACTGGCTGATCTGGAAG
AGCAGTCCGATGCGATGGGGGCCGAGTGGCACGCTGAGAAGGATCGCGTTAACGCCATCCAGAAGCTCAAGGAACAGCTG
GATACAGCACGTTCCGACGTCGATGTGGCACAGCGTCAGGGCAATCTCGCCAAGGCATCCGAGCTGATGTACGGCCTGAT
CCCGAACCTTGAAGCCCAGATTGCCAAGGCTCAGGAAGAGGAAGACGCAGCATCCAAGTCGGGTCTGTTCGCTGACAGTG
TGACAGAGCAGGGCATTGCGTCGGTTGTGTCCCGCTGGACGGGTATTCCGGTAGATCGCATGCTGGAAGGCGAGCGCGCC
AAGCTCATGCGGATGGAAGACACCTTGCGTGATCGTGTCGTCGGGCAGGAGCAGGCACTCGTTGCGGTTTCCAATGCTGT
TCGTCGTGCCCGTGCAGGTCTTCAGGATCCGAACCGCCCGATTGGCTCGTTCCTGTTCCTTGGCCCAACGGGTGTAGGTA
AGACCGAGCTGACGAAGGCGCTGGCTCAGTTCCTGTTTGATGACGAAAAGGCCCTGCTGCGGATCGACATGAGTGAATTC
ATGGAGAAGCATGCGGTGTCCCGTCTGATCGGTGCGCCTCCGGGTTATGTTGGTTACGACGAAGGTGGCGTGCTGACGGA
AGCGGTTCGTCGTCGTCCGTATCAGGTCATCCTGTTTGATGAGGTGGAGAAGGCCCATGAGGACATCTTCAACATCCTGC
TTCAGGTTCTGGATGACGGTCGCCTGACGGATGGGCAGGGTCGTGTGGTGGATTTCCGCAACACGATCATTGTTCTGACC
AGTAACCTTGGCTCGGATGTTCTGGCCAATCAGGAAGATGGTGAGTCGCCGGATCTGGTTCAGGCTCAGGTCATGCAGGT
CGTGCGTAATCACTTCCGGCCGGAATTCCTGAACCGTCTGGATGAGATCATCCTGTTCTCCCGTCTGCAGCGGGCAGATA
TGGGACGGATTGTCGATATTCAGCTCAGCCGCCTGCGTCAGCTTCTGGAAGATCGCAAGATCACTCTGGAACTGGATGAG
AAGGGTCGGGAGTGGCTTGCTGAAGCCGGATACGATCCGGTTTACGGTGCACGTCCTCTGAAGCGCGTGATCCAGCGTAG
TCTTCAGAACCCGCTGGCAGGTCTGTTGCTGGATGGAACCATCCGGGATGGGGACACCATCCACGTTTCTGCGGGTGACA
AGGGACTTACGATTAACGGTCATCCCGTCTCGCAGGACTGA

Protein sequence :
MDIQKFTERSQGFLQAAQTIALRDYHQQLTPEHLLKALLDDEQGAASGLIRAAGGDPKVVQAANDAALAKLPKVQGGGAG
QPQATPDFVRLLDTAEAAAKNAGDSHVAQDRLLVAIAASNSPAGKALVEGKADASALERAVAQIRKGRTVTSASAENTFD
ALKKYARDVTAVAQAGKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPEALRNKKLMS
LDMGALIAGAKFRGEFEERLKAVLKEVETAEGEIILFIDEMHTLVGAGRSDGAMDASNLIKPELARGTLHCIGATTLDEY
RKYIEKDAALARRFQPVFVGEPSVADTISILRGIKEKYELHHGVRITDNAIVSAATLSNRYITDRFLPDKAIDLIDEAAS
RLRMQIDSKPEALDELDRRIIQLKIEREAIRKEDDTASKDRLQALEAELADLEEQSDAMGAEWHAEKDRVNAIQKLKEQL
DTARSDVDVAQRQGNLAKASELMYGLIPNLEAQIAKAQEEEDAASKSGLFADSVTEQGIASVVSRWTGIPVDRMLEGERA
KLMRMEDTLRDRVVGQEQALVAVSNAVRRARAGLQDPNRPIGSFLFLGPTGVGKTELTKALAQFLFDDEKALLRIDMSEF
MEKHAVSRLIGAPPGYVGYDEGGVLTEAVRRRPYQVILFDEVEKAHEDIFNILLQVLDDGRLTDGQGRVVDFRNTIIVLT
SNLGSDVLANQEDGESPDLVQAQVMQVVRNHFRPEFLNRLDEIILFSRLQRADMGRIVDIQLSRLRQLLEDRKITLELDE
KGREWLAEAGYDPVYGARPLKRVIQRSLQNPLAGLLLDGTIRDGDTIHVSAGDKGLTINGHPVSQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 6e-104 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B932_1721 YP_006984227.1 ATP-dependent Clp protease, ATP-binding subunit ClpB VFG2076 Protein 2e-117 45
B932_1721 YP_006984227.1 ATP-dependent Clp protease, ATP-binding subunit ClpB VFG2084 Protein 3e-105 41