Gene Information

Name : PACID_07550 (PACID_07550)
Accession : YP_006979948.1
Strain : Propionibacterium acidipropionici ATCC 4875
Genome accession: NC_019395
Putative virulence/resistance : Unknown
Product : N-6 DNA methylase
Function : -
COG functional category : -
COG ID : -
EC number : 2.1.1.72
Position : 856789 - 858426 bp
Length : 1638 bp
Strand : -
Note : -

DNA sequence :
GTGATGGCTCGTAGACCTGTGAAGGCCCAGCCCTCGACCCGCAAGGAGCTCAAGGACACCCTGTGGAAGGCGGCCGACAA
GCTGCGCGGCTCGATGAGCGCCGCCCAGTACAAGGACGTCGTGCTGGGGCTCATCTTCCTCAAGTACGTCTCGGACGCCT
TCAACGAGCGGCGCGAGCAGATCACCGAGGAGCTGCGCGCCGACGGCTACGACGACGAGGCGATCGCCGAGACCCTGGAG
GATCGCGACGAGTACGCCTCGGGCGCCTTCTGGGTGGATCCCGACGCCCGCTGGGACTCCCTGGTGGCCGACGCGAAGGT
GGCCGGGGAGACGACCATCGGCCAGCGGATCAATGAGGCGATGGATCTGCTGATGCACGACAACCCGTCGCTGGAGGGCA
CCCTGCCGAGGCTCTTCAACCGGGACAATGTGGATCAGCGCCGGCTGGCCGAGCTGCTGGATCTGCTGAACTCGGTGCAG
TTCTCCGGGATGGGGGCTGCGAAGGCGCGGGATCTTCTGGGCGAGGTGTACGAATACTTCCTGGCGAATTTCGCCTTGTC
GGAGGGCCATCGGGGTGGGGAGTTCTACACCCCCGCATCTGTGGTGCGCGTGATCGTGGAGGTGCTTCAGCCCAGGAAGG
GCCGGGTGTACGACCCGTGCTGCGGATCGGGCGGCATGTTCGTCCAGGCGGAGAAATTCCTGGACGCCCACGACGCCGAC
CCGACGAACCTGTCGGTCTACGGGCAGGAGCTCAACGAGTCGACGTGGCGGATGGCGAAGATGAATCTGGCCATCCACGG
GCTCAACGGGGATCTGGGGCCGCACTGGGGAGACACTTTCGCGATGCCCTATCACGGGGACCGCCAGATGGACTACGTGA
TGGCCAATCCGCCCTTCAACATCAAGGACTGGAGCCGCCGCGAGTCCGACCCACGCTGGGTCTACGGGGTGCCGCCGGCC
AAGAATGCGAACTACGCGTGGATGCAGCACATCATCTCCAAGCTGGCGCCGGGCGGGATGGCCGGTGTGGTGATGGCCAA
CGGGTCGATGACGTCGACGTCGAACGGCGAGGGCGACATCCGGGCCCAGTTCGTGGAGAACGACCTGGTCGCGGCCATGG
TGGCGCTGCCCGACAAGCTGTTCCGCTCGACCGGGATTCCGGCCTGCCTGTGGTTCTTCGCGAAAGACAAAGGGGCCGGA
GACAGTGGCTCGGTGGATCGGCGCGGGCAGGTGCTGTTCATCGACGCCCGTGAGATGGGCTACATGATCACCAGGGCTCA
GCGGGGATTGAAGGCCGAGGAGATCCAGCGGATCGCCGACACCTTCCACGCCTGGCGCGGGATGGAGCAGCTGAGTCTGG
CTACCGCGGATGTCACGGTCGACGACGAGGACTCGGTCTCTGCTTCCGGGACTGAATATGAGGATGTGCCCGGATTCTGC
AAGAGCGTGAGCATCGCGGAGATCAAGGACGCCGGATACGCGCTGACGCCGGGCAGGTATGTCGGAATGGCGGGAGCCGA
GGAGGACGACGAACCCCTGGACGAGAAGATCGCGAGGCTGACGAGTGAGTTGAACAAGCAGCTCGACGAGGCCACGGCAC
TCGGTGCAACAGTGCGCGAGCAGCTCGGGAGGCTGTGA

Protein sequence :
MMARRPVKAQPSTRKELKDTLWKAADKLRGSMSAAQYKDVVLGLIFLKYVSDAFNERREQITEELRADGYDDEAIAETLE
DRDEYASGAFWVDPDARWDSLVADAKVAGETTIGQRINEAMDLLMHDNPSLEGTLPRLFNRDNVDQRRLAELLDLLNSVQ
FSGMGAAKARDLLGEVYEYFLANFALSEGHRGGEFYTPASVVRVIVEVLQPRKGRVYDPCCGSGGMFVQAEKFLDAHDAD
PTNLSVYGQELNESTWRMAKMNLAIHGLNGDLGPHWGDTFAMPYHGDRQMDYVMANPPFNIKDWSRRESDPRWVYGVPPA
KNANYAWMQHIISKLAPGGMAGVVMANGSMTSTSNGEGDIRAQFVENDLVAAMVALPDKLFRSTGIPACLWFFAKDKGAG
DSGSVDRRGQVLFIDAREMGYMITRAQRGLKAEEIQRIADTFHAWRGMEQLSLATADVTVDDEDSVSASGTEYEDVPGFC
KSVSIAEIKDAGYALTPGRYVGMAGAEEDDEPLDEKIARLTSELNKQLDEATALGATVREQLGRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hsdM BAD24842.1 HsdM protein Not tested Type-V SCCmec Protein 2e-126 48
hsdM YP_251979.1 type I restriction-modification system DNA methylase Not tested SCCmec Protein 6e-126 48
hsdM BAH57701.1 type I restriction-modification system DNA methylase Not tested Type-VII SCCmec Protein 2e-126 48
api49 CAF28523.1 putative HsdM-like N-methyl transferase Not tested YAPI Protein 4e-111 43