Gene Information

Name : PACID_07360 (PACID_07360)
Accession : YP_006979929.1
Strain : Propionibacterium acidipropionici ATCC 4875
Genome accession: NC_019395
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone protein ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 832280 - 834877 bp
Length : 2598 bp
Strand : +
Note : -

DNA sequence :
ATGGACACGAATCTCACCACGATGAGTCGCGACGCGGTCTCAGCCGCCTCGCGTCACGCCTTGGCTCACGGCAACCCCTC
CGTCGAGCCCTCACACCTTCTCCACGCCCTGTTCACGATTCCTGACAACACCGTCGGGCCGCTGGTCAAGGGCCTCGGGG
CCGAGCCCGAGCAGGTCGACCGGGTGGCCACCGAGGCGATGCGCAAGCTGCCGTCGTCCTCGGGCGCATCGGTCTCACAG
CCCCAGCTGTCCGGCTCCTTCGCCCGGGTCATCGCCGATGCGCAGAACCGCGCCCAGCAGCTCGGCGACTCCTTCGTGGC
CACCGAGCACCTGCTCATCTCCCTGACCACCGTCCCCAGCGACGTCCAGCCCGGGCTGGCCGCACTCGGCCTCAGGGCCG
ACGCCCTGACCCGCGCCTTCAACGAGGCCCGCGGCGACCGCCGCGTGACCTCCGAGGAGTCCGAGGGCGGCGAGTCCGCC
CTGGCCAAGTACTCGGTGGACCTCACCGAGCGCGCCCGCTCCGGCAAGCTCGACCCGGTGATCGGCCGTGATGCCGAGAT
CCGCCGGGTGGTGCAGGTGCTGGCCCGTCGTACCAAGAACAACCCGGTGCTGATCGGGGAGCCCGGCGTCGGCAAGACCG
CCGTCGTCGAGGGCCTGGCCCAGCGCGTGGTCGCTGGCGACGTCCCCGACTCCCTGAAGGGCCGCCGGGTGGTCTCCCTG
GATCTGTCCTCGATGGTCGCCGGGGCCAAGTACCGCGGCGAGTTCGAGGAGCGCCTCAAGGCCGTCCTGAACGAGATCAA
GGAGGCCGAGGGGCAGATCATCACCTTCATTGACGAGCTGCACACCGTCGTCGGTGCCGGCGCCACCGGTGAGGGATCGA
TGGACGCCGGGAACATGCTCAAGCCGATGCTGGCGCGCGGCGAGCTGCGGATGATCGGCGCCACCACCCTCGACGAGTAC
CGCGAGCACATCGAGAAGGATCCCGCTTTCGAGCGCCGGTTCCAGCAGGTCTTCGTCGGCGAGCCGTCGGTGGAGGACAC
CATCGCCATCCTGCGTGGTCTGCGTGAACGCTACGAGGCCCACCACAAGGTGCGCATCACCGATGGCGCGCTGGTGGCCG
CCGCGTCCCTGTCGAACCGGTACATCACCGCGCGGCAGCTGCCCGACAAGGCCATCGACCTGATCGACGAGGCCGCCTCG
AGGCTGCGCATGGAGATCGACTCCTCCCCGGAGGAGATCGACACGCTGCGCCGCGAGGTGGACCGGATGAAGATGGAGAT
CTTCGCCGTCGAGAAGGAGGAGGACCCGGCGTCGCGGCAGCGGCTGGCCCGCCTGCAGGGCGAGATGGCCGACAAGCAGG
AGAGGCTGCGCGGTCTCGAGTCCCGCTGGCAGGCCGAGAAGGCTGGGCTGAACCGGGTCGGCGAGCTCAAGACGCAGATC
GACGGTCTGCGCACCACCGCCGACAAGTTCCAGCGCGAGGGTGATTTCGGCAAGGCCTCGGAGATCCTCTACGGGCAGAT
CCCCGGCCTGGAGAAGGAGATGGAGGCGGCCGCGCAGGCCGAGGAGGAGACTCCCCGGATGGTCTCGGAGGAGGTCGGCA
CCACCGACATCGCCGAGGTCGTCTCGGCGTGGACCGGAATCCCGGTCGGCCGGATGATGCAGGGGGAGCAGGAGAAGCTG
CTCAAGATGGAGTCGCGGATCCACGACCGCCTCATCGGCCAGGACAAGGCCGTGGCGACGGTGGCCGACGCCGTGCGCCG
CTCCCGGGCCGGAATCTCCGACCCGAACCGACCCACCGGTTCCTTCCTGTTCCTGGGGCCCACCGGCGTCGGCAAGACCG
AGCTGGCGAAATCCCTGGCCGAGTTCCTCTTCGACGACGAGTCCTCGATGGTCCGCATCGACATGAGCGAGTACATGGAG
AAGCACTCGGTCTCCCGCCTCGTCGGCGCCCCTCCGGGCTACGTCGGCTACGAGGAGGGCGGTCAGCTCACCGAGGCGGT
GCGCCGGCGTCCCTACTCGGTCATCCTGCTCGACGAGGTGGAGAAGGCCCATCGCGACGTCTTCAACATCCTGCTGCAGG
TGCTCGACGACGGACGCCTGACCGACGGCCAGGGCCGCACGGTGGACTTCCGCAATACCATCCTCATCCTCACCTCGAAT
CTGGGCTCCCAGTTCCTCTCGGACCAGAGCCTGGATGAGACCGCCAGGCGTGAGGCCGTGATGGGTGCGGTGCACGCCGC
CTTCCGTCCGGAGTTCCTCAACAGGCTCGACGACATCGTCCTGTTCGACCCGCTCACCACGGCGGACCTGAGCCGGATCG
TCGACACCAACCTGGCCAAGCTCAACTCCCGGCTGGCCGAGCGCCAGATCACCGTCGAGCTGACCCAGGCCGCCAAGGAC
TGGCTGGCGATGACCGGCTACGACCCGGTCTACGGCGCCCGTCCGCTGCGCAGGCTGATCCAGACGACCGTCGAGGACAA
GCTGGCCAGGCGGATGCTGTCGGGCCAGACCGTGGAGGGTGATGCCGTCACCTTCGACGTGAGCTCGGACTCCGACGGAC
TGGAGATCGTCACCGGCGATCCCGCACCGGTCGCCTGA

Protein sequence :
MDTNLTTMSRDAVSAASRHALAHGNPSVEPSHLLHALFTIPDNTVGPLVKGLGAEPEQVDRVATEAMRKLPSSSGASVSQ
PQLSGSFARVIADAQNRAQQLGDSFVATEHLLISLTTVPSDVQPGLAALGLRADALTRAFNEARGDRRVTSEESEGGESA
LAKYSVDLTERARSGKLDPVIGRDAEIRRVVQVLARRTKNNPVLIGEPGVGKTAVVEGLAQRVVAGDVPDSLKGRRVVSL
DLSSMVAGAKYRGEFEERLKAVLNEIKEAEGQIITFIDELHTVVGAGATGEGSMDAGNMLKPMLARGELRMIGATTLDEY
REHIEKDPAFERRFQQVFVGEPSVEDTIAILRGLRERYEAHHKVRITDGALVAAASLSNRYITARQLPDKAIDLIDEAAS
RLRMEIDSSPEEIDTLRREVDRMKMEIFAVEKEEDPASRQRLARLQGEMADKQERLRGLESRWQAEKAGLNRVGELKTQI
DGLRTTADKFQREGDFGKASEILYGQIPGLEKEMEAAAQAEEETPRMVSEEVGTTDIAEVVSAWTGIPVGRMMQGEQEKL
LKMESRIHDRLIGQDKAVATVADAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKSLAEFLFDDESSMVRIDMSEYME
KHSVSRLVGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEVEKAHRDVFNILLQVLDDGRLTDGQGRTVDFRNTILILTSN
LGSQFLSDQSLDETARREAVMGAVHAAFRPEFLNRLDDIVLFDPLTTADLSRIVDTNLAKLNSRLAERQITVELTQAAKD
WLAMTGYDPVYGARPLRRLIQTTVEDKLARRMLSGQTVEGDAVTFDVSSDSDGLEIVTGDPAPVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-110 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PACID_07360 YP_006979929.1 ATP-dependent chaperone protein ClpB VFG2084 Protein 2e-113 42