Gene Information

Name : PACID_06730 (PACID_06730)
Accession : YP_006979867.1
Strain : Propionibacterium acidipropionici ATCC 4875
Genome accession: NC_019395
Putative virulence/resistance : Unknown
Product : Putative oligopeptide ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 764422 - 766116 bp
Length : 1695 bp
Strand : +
Note : -

DNA sequence :
ATGAGCACGGACACCGTTGACGAGGTGGCTGCCGAGGGCTCCGACGTCCTGCGGATCACCGATCTCAATGTCCGCTTCGC
CACCGACTCCGGAACGGTCAATGCCGTCGAGGACGTCAGCCTGGAGGTCGGCGACCGGGAGATCGTCGCGATCGTGGGGG
AGTCTGGCTCCGGCAAGTCGGTGACCGCCAGGTCCATCCTCGGCCTGCTGTCCGATACGGCCTCGGAGCACGGGGCCGTG
GTGCTGCGCAGCCATTCGGGAGGGGAGACGACCGACGTCGTCGGCCTGTCCTCCTCGCGGCTGCGCAGGATCCGTGGGGC
GGACGCCGCGATGGTCTTCCAGGAGCCCTCCACGACGCTGAACCCCGTGTTCACCGTGGGGTGGCAGATCGCCGAGGGAC
TGCGCGCCCACGGGAAGTACAGTCGGGCCGAACTGCGCAGGCGCAGCGTCGAGATGCTGAAGCTGGTGGGGATTCCCGAT
CCCGAGCGTCGCGTCAACGACTACCCGCACCAGTTCTCAGGCGGGCAGAAGCAGCGCATCGTCATCGCGATGGCGCTGTC
GCTGAACCCCGGGCTCATCATCGCCGACGAACCCACGACCGCCCTGGACGTCACCGTGCAGGCCGAGATCCTGGGCCTGC
TGCGTCGCTGCCGGGAGGAGATGGGGGCGTCCATCATCCTCATCACCCACAACATGGGGGTGGTGGCCGACCTGTCCGAC
CGGGTGGTGGTGATGTACCAGGGGCGGATCGTGGAGAGCAATGAGGTGCACGAGCTCTTCGCCCATCCCCAGCACGAGTA
CACCAAGGCTCTTCTGGCGGCAGTCCCGCGGATAGGCCGGCATCCGGTCCGGGAGGTGGTCGACCAGGACGGCGATCCCG
TCGTGACGGCCCGGGATCTGCGGATCGAGTACCCGGGGAGACTGGGCAGGCCCGGTTTCCAGGCGGTCCGCGGCATCGAC
CTCGAGCTGCGTCCCGGGGAGGTGCTGGGGCTGGTGGGTGAGTCCGGCTCCGGCAAGACGACGATCGGTCGGGCGATCGC
GGGCCTCACGCCGGTCAGCGGCGGCTCGCTGACGGTGCTGGGCCACGAGATGCTGGGCATTCGCGAGCGCCGGTTCCGCT
CCGCCCGCCGCGACCTCGGCTTCGTCTTCCAGGACCCGGCGTCCAGCTTCGATCCGCAGCTGACGATCGGTGACTGCATC
GCCGAGCCGTTGGTGGTCCACGGCGCCTTCCGCGACGCGGCCGCAGCTCGTGGCCGGGTGGAGGAGCTTCTCGCCGAGGT
GCAGCTGCCGGGTGAGTACGCGAACCGTTATCCCCACGAGCTGTCGGGCGGCCAGCGTCAGCGGGTCAGCCTGGCACGCG
CGATCAGCCTGGATCCGACACTGCTCATCGCCGACGAACCCACCAGCGCTCTGGACGTCTCGGTGCAGGCGAAGGTGCTC
GACCTGTTCCGGACGCTGCAGGACCGCCTCCACTTCGCCTGCCTGTTCATCACTCACGATCTGGGGGTGGTGGATCAGGT
GGCCCATCGCGTCGCGGTGCTTCATGAGGGACGGGTCGTCGAGATGGGCACCACGAGGCAGGTGCTCACCAGCCCCGAGG
ACGAGTACACGAAACGGCTGGTGGCGGCCATCCCGGTGCCCGACCCCTCCGAACAGGCCCAGAGGCGGATGAGGGCGGTG
GCCGAGAGCGGCTGA

Protein sequence :
MSTDTVDEVAAEGSDVLRITDLNVRFATDSGTVNAVEDVSLEVGDREIVAIVGESGSGKSVTARSILGLLSDTASEHGAV
VLRSHSGGETTDVVGLSSSRLRRIRGADAAMVFQEPSTTLNPVFTVGWQIAEGLRAHGKYSRAELRRRSVEMLKLVGIPD
PERRVNDYPHQFSGGQKQRIVIAMALSLNPGLIIADEPTTALDVTVQAEILGLLRRCREEMGASIILITHNMGVVADLSD
RVVVMYQGRIVESNEVHELFAHPQHEYTKALLAAVPRIGRHPVREVVDQDGDPVVTARDLRIEYPGRLGRPGFQAVRGID
LELRPGEVLGLVGESGSGKTTIGRAIAGLTPVSGGSLTVLGHEMLGIRERRFRSARRDLGFVFQDPASSFDPQLTIGDCI
AEPLVVHGAFRDAAAARGRVEELLAEVQLPGEYANRYPHELSGGQRQRVSLARAISLDPTLLIADEPTSALDVSVQAKVL
DLFRTLQDRLHFACLFITHDLGVVDQVAHRVAVLHEGRVVEMGTTRQVLTSPEDEYTKRLVAAIPVPDPSEQAQRRMRAV
AESG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-71 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-71 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 1e-71 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-71 43