Gene Information

Name : PACID_30960 (PACID_30960)
Accession : YP_006982211.1
Strain : Propionibacterium acidipropionici ATCC 4875
Genome accession: NC_019395
Putative virulence/resistance : Unknown
Product : Integrase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3264344 - 3265561 bp
Length : 1218 bp
Strand : -
Note : -

DNA sequence :
ATGGATCGGGAGCTGTCGATGGCCGCACGCCGTGAGATCACCAAGAAGTACGCCCACCAGTACCGGGCCGCATCGAAGAA
GGACAAGTCGGTGCTGCTGGACTCCCTGACCGCCACCACAGGCTGGACCCGTGACCACGCCCGCCGCGCGATCCGGGCAG
CCCTGACGCGGAAAGGTGCCGCGTCCCAGCAGAAGCGCCGGCCCCGGCCCCGCAAGTACTCCTACGACGCCGTGAAGGTC
CTCCAGCACGTGTGGAGCGTGACGGGTCAGCCCTCCGGGAAGTACCTGGCCCCCGTGATGGACGACACCCTGAACAGGCT
GGAACGCTTCAAGGAGTTCGGGAAAGTCACCCGCCGGGCCACCCCCGCGGTGCTGACCGAACTGCGCTCCATGTCGGCGG
CCACCATCGACAGGTACCTGAAACCCTTCAAGGACGCCGCCTACCCGGCCGCCGGCCTGTCAGCCACCCGACCCGCCCCT
CACATCCTGCGTGCCGCGGTGCCGCTGCGCACCAGCCTGGACGGGCCGATCACCGATCCCGGGCTGGTAGAGGTCGACAC
CGTGGCCCACTGCGGCCACACCCTGGTCGGGGAATTCCTGTGGACCTTGTCGGCCACCCTGCCCGTCTCCGGCTACACGG
TCCTGACCACGGTCAAGAACAAGGCATTCGTCCACATCGGGGCCGGCATGGACCGGATCGTCGACCAGATGCCCGTGCCC
GTGGCGGAGGTCCACGTCGACAACGGGTCGGAGTTCATCAACTGGGGCCTCATCGACTGGGCGAAGGGCCACGACATCGC
GATGTCCCGCTCGCGGCCCTACAAGAAGAACGACAACGCCCACGTCGAGCAGCGCAACGGCGACTGGGTCCGCCGCCACG
CCTTCAGATACCGCTACGAGACCGCAACCGAGCTTCAGCTGCTCAACCAGTTGTGGCCCCTGGTGATGGCCCGCAAGAAC
CACCTACTGCCCTGCGTCAAGGCCATCGGCTGGACCACCACCTCCGCGGGGCGCAAGAAGCGGGTCTACGACAAGCCCAA
GACCCCTTACCAGCGGCTGGTCGACTCCGGTGTCCTGGACCCCGCCACACGGGCCCGCCTGGCAGCCGAGCACGACAGGC
TCAACCCCGCCGATCTGGCCCGGCGGATCACCGACATCCAGAACCAGCTCATCCGCCTAGCCGAACGTCGCACCCAGACC
GACCAACCCGCCGCCTGA

Protein sequence :
MDRELSMAARREITKKYAHQYRAASKKDKSVLLDSLTATTGWTRDHARRAIRAALTRKGAASQQKRRPRPRKYSYDAVKV
LQHVWSVTGQPSGKYLAPVMDDTLNRLERFKEFGKVTRRATPAVLTELRSMSAATIDRYLKPFKDAAYPAAGLSATRPAP
HILRAAVPLRTSLDGPITDPGLVEVDTVAHCGHTLVGEFLWTLSATLPVSGYTVLTTVKNKAFVHIGAGMDRIVDQMPVP
VAEVHVDNGSEFINWGLIDWAKGHDIAMSRSRPYKKNDNAHVEQRNGDWVRRHAFRYRYETATELQLLNQLWPLVMARKN
HLLPCVKAIGWTTTSAGRKKRVYDKPKTPYQRLVDSGVLDPATRARLAAEHDRLNPADLARRITDIQNQLIRLAERRTQT
DQPAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0921 YP_005160013.1 integrase catalytic subunit Not tested Not named Protein 3e-73 46
CDBH8_0909 YP_005160001.1 integrase catalytic subunit Not tested Not named Protein 1e-65 45