Gene Information

Name : PACID_02980 (PACID_02980)
Accession : YP_006979502.1
Strain : Propionibacterium acidipropionici ATCC 4875
Genome accession: NC_019395
Putative virulence/resistance : Virulence
Product : Aldehyde dehydrogenase (NAD(+))
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.3
Position : 320639 - 322162 bp
Length : 1524 bp
Strand : +
Note : -

DNA sequence :
ATGACGACATACACGCGACCGAATACGCAGGGGAGCCTGCTCGATTTCGCGGTCGAGTACCAGAACTTCATCGGTGGGGA
ATTCGTGGCGCCGGTCAAGGGGAATTACGGCGAGGTGAGGACGCCGGTCACCGGGCAGGTCTACACCTCGGTGGCGCGCT
CCACCTCGGAGGACGTCGACCGGGCCGTCGACGTCGCGTGGAAAGCGTTCCCCGCCTGGTCGCGCGCCTCGAACGCCGAG
CGCGCCGAGGTGCTGTGGAGGATCGCCGAGCGGATCGACGAGCACCGCGAGGAGATCGCTCTGGCCGAGACCTGGGACAA
CGGCAAGCCCATCAGGGAGACGCTCGGCGCAGACATCCCGCTGGCCGCTGACCATTTCCGGTACTTCGCCGCGACGATCC
GCGCACAGGAGCAGGTCTCCACGCAGATCGACCACGACACGGTCTCCTACCAGTTCCGCGAGCCGCTGGGTGTCGTCGCG
CAGATCATCCCGTGGAACTTCCCCATCCTGATGGCTGCGTGGAAGATCGCACCGGCCCTGGCCGCGGGAAACACCATCGT
CATGAAGCCGGCGTCCGAGACCCCGATCTCCCTGCTCATCCTGGTGGAGCGGATCCAGGACCTGCTGCCGCCCGGAGTGC
TCAATATCGTCGAGGGCAAGGGCTCGGAGATCGGCACCGTGCTGTCGCGTCACCCGAGAATCCGTAAACTGGCCTTCACC
GGGTCGACGGAGGTGGGCCGCGATATCGCACTGGACGCCGCTCAGCTGCTGATTCCAGCCACCCTGGAACTGGGTGGGAA
GAGCCCGAACATTTTCTTCGACGATATCGCCGATCACGACGACGGCTTCTACCAGAAGGCCCTCGAGGGGTTCAATCTCT
TCGCCTTCAACAAAGGTGAGGTGTGCACCTGCCCGTCCCGCGCCCTGGTGCAGAAGTCGATCTTCGACTCCTTCGTGCCC
CGTGCCGTCGCGCGGCTGGGCACCGCGAAGCAGATCAATCCCCTCGATACCGACTGCCAGGTCGGCCCGCAGGTCTCGGC
GCGCCAGCGCGACAAGATTCTGGATTACATCAGGATCGGCAAGCAGGAGGGGGCCACCGTCCGTGCGGGCGGCGGCCCGG
GGGAGCTGGACGGCGATCTGGCCGGCGGCTACTACATCCAGCCGACCGTGCTGGAGGGCGAGAACTCGATGCGCATCTTC
CAGGAGGAGATCTTCGGGCCCGTTCTGGCCCTGACCCCCTTCGAGGACTACGACGATGCGATCCGGATCGCCAACGACAC
CAGCTACGGGTTGGGGGCCGGCGTCTGGACCCGCAACGGCAACCGTGCTTACCGCGCCGGGCGGGCCATTCTCGCGGGCC
GGGTGTGGACGAACTGCTATCACATGTATCCGGCCGGAGCCCCCTTCGGCGGGTACAAGGAGTCCGGCATCGGGAGGGAG
ACCGACCAGGTGATCCTCAACGCCTACCAGCAGATCAAGGACCTTCTGGTCTCCTACACCGAGGCCCCTCAGGGGCTGTT
CTGA

Protein sequence :
MTTYTRPNTQGSLLDFAVEYQNFIGGEFVAPVKGNYGEVRTPVTGQVYTSVARSTSEDVDRAVDVAWKAFPAWSRASNAE
RAEVLWRIAERIDEHREEIALAETWDNGKPIRETLGADIPLAADHFRYFAATIRAQEQVSTQIDHDTVSYQFREPLGVVA
QIIPWNFPILMAAWKIAPALAAGNTIVMKPASETPISLLILVERIQDLLPPGVLNIVEGKGSEIGTVLSRHPRIRKLAFT
GSTEVGRDIALDAAQLLIPATLELGGKSPNIFFDDIADHDDGFYQKALEGFNLFAFNKGEVCTCPSRALVQKSIFDSFVP
RAVARLGTAKQINPLDTDCQVGPQVSARQRDKILDYIRIGKQEGATVRAGGGPGELDGDLAGGYYIQPTVLEGENSMRIF
QEEIFGPVLALTPFEDYDDAIRIANDTSYGLGAGVWTRNGNRAYRAGRAILAGRVWTNCYHMYPAGAPFGGYKESGIGRE
TDQVILNAYQQIKDLLVSYTEAPQGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-131 58
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-136 57
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-136 57
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-136 57
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-136 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PACID_02980 YP_006979502.1 Aldehyde dehydrogenase (NAD(+)) VFG0082 Protein 8e-132 58