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Name : clpC (PACID_28400) Accession : YP_006981962.1 Strain : Propionibacterium acidipropionici ATCC 4875 Genome accession: NC_019395 Putative virulence/resistance : Virulence Product : Negative regulator of genetic competence ClpC/MecB Function : - COG functional category : - COG ID : - EC number : - Position : 2994100 - 2996625 bp Length : 2526 bp Strand : - Note : - DNA sequence : ATGTTCGAACGGTTCACAGACCGGGCGCGTCGGGTCGTCGTCCTGGCCCAGGACGAGGCCAAGGCCCTGAACCACAATTA CATCGGTACGGAGCACCTCCTGCTGGGACTCATCAGCGAGGGGGAGGGAGTGGCCGCCAAGGCCCTCGAGTCCCTCGACA TCTCCCTCGAGGCTGTGCGAGCCCAGGTGGAGGAGATCATCGGGCACGGCAACAACACGCCGGCCGGGCACATCCCGTTC ACCCCGCGGGCCAAGAAGGTTCTCGAACTGAGCCTGCGCGAGGCCCTGCAGATGAACCACTCGTACATCGGCACCGAGCA CATCCTGCTCGGGCTGATCCGCGAGGGGGAGGGTGTGGCCGCCCAGGTGCTGATCCGGCTGGGTGCCGATCTCAACACGG TGCGCAACACCGTGCTGCAGCTGCTCCAGGGATACCAGGGCAACGACAAGGAGGCCGCTACGGCCGGTGCTCCCGACGTC GGGCCCGCCCAGTCCAGCGCGACGGTGCTGGACCAGTTCGGTCGCAACCTGACCCAGGCTGCGAAGGACGGCGAACTCGA TCCCGTGATCGGTCGTGAGACCGAGATCGAGCGGGTGATGACCGTTCTGAGCCGCCGTACCAAGAACAACCCCGTCCTGA TCGGCGAGCCCGGCGTCGGCAAGTCCGCCTGCGTCGAGGGCCTCGCCCAGGCGATCGTGCGCGGCGACGTCCCCGAGACG CTGCGCGGCAAGCAGATCTACAGCCTCGATCTCGGTTCGATGGTGGCGGGCTCCCGCTACCGCGGCGATTTCGAGGAGAG GATGAAGAAGGTCCTCAAGGAGATCAAGACCCGCGGCGACATCGTCCTGTTCATCGACGAGATCCACACCCTGGTGGGTG CGGGTGCCGCCGAGGGAGCCATCGACGCCGCCAGCATCCTCAAGCCGATGCTGGCCCGCGGCGAGCTTCAGACGGTGGGC GCCACGACTCTCGACGAGTACCGCAAGCACATCGAGAAGGACGCCGCCCTGGAGCGCCGGTTCCAGCCGATCCAGGTGGC CGAGCCCTCGGTGCCGCTGACCATCGAGATCCTCAAGGGCCTGCGCGACAAGTACGAGGCTCACCACAAGATCACGATCA CCGATGAGGCGATCTCCGCCGCGGCGAACCTGTCGGCCCGCTACGTGCAGGACCGCTTCCTTCCGGACAAGGCGATCGAC CTGATCGACGAGGCCGGGGCCCGGATGAGGATCCGTCGGATGACGGCTCCGCCGGACCTGCGCGAGATCGACGACAAGAT CGCCCAGGTGCGCATCGACAAGGAGTCGGCGATAGACGCCCAGGACTTCGAGCGGGCTGCCGGTCTGCGTGACGACGAGA AGAAGCTGATCTCCGAGCGCGAGGCCAAGGAGGAGGCGTGGAAGGCAGGTGATTCCTCGGTGCCGGCGGTGGTCGGCGAG GAGGAGATCGCCGAGGTGCTCTCCAGCTCCACCGGCATCCCGGTCTTCAAGCTCACCGAGGAGGAGTCCGAGAGGCTGCT CCACATGGAGGACGAGATCGGCAAGCGGTATGTCGGCCAGACGGACGCCGTCAAGGCGCTCTCGCGGTCGATCCGCCGTA CCCGTGCCGGCCTGAAGGATCCGAAGCGCCCGATGGGCTCGTTCATCTTCGCCGGGCCTTCGGGCGTCGGCAAGACCGAG CTCACCAAGGCGCTCACCGAGTTCCTGTTCGGCGACGAGGACGCCCTCATCACGCTGGACATGTCGGAGTACTCCGAGAA GCACACGGCGTCGCGGATGTTCGGTTCCCCGCCAGGCTTCGTCGGATACGAGGAGGGCGGGCAGCTCACCGAGAAGGTGC GCCGCAAGCCGTTCTCGGTGATCCTGTTCGACGAGATCGAGAAGGCTCACCCCGACATCTTCAACTCGCTGCTGCAGATC CTCGACGAGGGGCGTCTGACCGATGCCCAGGGCCGCGTGGTGGACTTCAAGAACACGGTCATCGTGCTCACCACCAACCT CGGTACCCGGGACATCTCCAAGAGCGTCAATCTGGGGTTCTCGAAGGCGGGCGACGAGGAGTCGAGCTACGAGCGGATGA AGGCCAAGGTGACCGAGGAGCTGAAGGGGCACTTCCGTCCCGAGTTCCTCAACCGTCTTGACGAGATCATCGTCTTCCAC CAGCTCAGCCACGAGGACGTCCTGCGGATCGTCGACCTGATGGTTGGCGAGCTGGAGCAGCGTCTGGGAGACAAGGACAT GAGCATCGAGGTGACCCCGGCTGCCAAGCAGCTGCTGGCCGATCGGGGCTTCGACCCGCTGATGGGTGCCCGGCCGCTGC GTCGGACCATTCAGCGCGACGTCGAGGACGTGCTCGCCGAGAAGATCCTCTTCGGGGAGGTGAAGCCGGGACAGATCGTC CTGGTGGACGTCGCCCCGGAGGGCTCGGAGCAGCCCTTCACCTTCACCGGGACGTCTCGCGGGGAGCTCCCCGACGAGGT GCCGGCGGAGCTGACCTCCGGCGGCTCGGAGAGCGAAGCCTCCTGA Protein sequence : MFERFTDRARRVVVLAQDEAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVRAQVEEIIGHGNNTPAGHIPF TPRAKKVLELSLREALQMNHSYIGTEHILLGLIREGEGVAAQVLIRLGADLNTVRNTVLQLLQGYQGNDKEAATAGAPDV GPAQSSATVLDQFGRNLTQAAKDGELDPVIGRETEIERVMTVLSRRTKNNPVLIGEPGVGKSACVEGLAQAIVRGDVPET LRGKQIYSLDLGSMVAGSRYRGDFEERMKKVLKEIKTRGDIVLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTVG ATTLDEYRKHIEKDAALERRFQPIQVAEPSVPLTIEILKGLRDKYEAHHKITITDEAISAAANLSARYVQDRFLPDKAID LIDEAGARMRIRRMTAPPDLREIDDKIAQVRIDKESAIDAQDFERAAGLRDDEKKLISEREAKEEAWKAGDSSVPAVVGE EEIAEVLSSSTGIPVFKLTEEESERLLHMEDEIGKRYVGQTDAVKALSRSIRRTRAGLKDPKRPMGSFIFAGPSGVGKTE LTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGFVGYEEGGQLTEKVRRKPFSVILFDEIEKAHPDIFNSLLQI LDEGRLTDAQGRVVDFKNTVIVLTTNLGTRDISKSVNLGFSKAGDEESSYERMKAKVTEELKGHFRPEFLNRLDEIIVFH QLSHEDVLRIVDLMVGELEQRLGDKDMSIEVTPAAKQLLADRGFDPLMGARPLRRTIQRDVEDVLAEKILFGEVKPGQIV LVDVAPEGSEQPFTFTGTSRGELPDEVPAELTSGGSESEAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 72 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_006981962.1 | Negative regulator of genetic competence ClpC/MecB | VFG0079 | Protein | 0.0 | 58 |
| clpC | YP_006981962.1 | Negative regulator of genetic competence ClpC/MecB | VFG0080 | Protein | 4e-155 | 50 |
