Gene Information

Name : PACID_27820 (PACID_27820)
Accession : YP_006981904.1
Strain : Propionibacterium acidipropionici ATCC 4875
Genome accession: NC_019395
Putative virulence/resistance : Virulence
Product : ABC transporter related protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.34
Position : 2926724 - 2927563 bp
Length : 840 bp
Strand : +
Note : -

DNA sequence : 
ATGACCGATCACACATTCTCTGCTCAGGGGGTGGCCGTCGGCTACGGCGAACGCACCGTCATCGACGCCCTCGATCTGGA
CATCCCCGATCACGGCATAGGCGCCATCATCGGCCCCAACGGCTGCGGCAAGTCGACCCTGCTGCGCACCCTGGCCAGGC
TGCTGCGCCCGACCACCGGATCGGTGGTGCTCGACGGGCAGGCGATCCATTCCCTTCCCACCCGGAAGGTGGCCCGGGTG
CTCGGGCTGCTCCCGCAGTCGCCGACCTGCCCGGAGGGCATCGCGGTGGCCGATCTCGTCTCCCGCGGACGGGCCCCCCA
CCGCGGCGCCTTCGCCCGCTGGACCTCCGACGACGACGACGCGGTCGCCGAGGCGCTGGAGCAGACCGGCACCGCCGAGC
TGGCCCACCGGCCGGTCGACGAGCTGTCCGGCGGGCAGCGCCAACGGGTGTGGATCGCCATGGCGCTGGCCCAGCAGACC
GACCTGCTGCTTCTGGACGAACCCACCACCTACCTGGACCTCGCCTTCCAGATCGACGTGCTCGAGCTGCTCGGCCGCCT
CAACCGGGATCACGGCACGACCGTGGTGATGGTGCTCCACGACATCAACATGGCGGCCCGCTACTCCGACTGGCTGGTGG
CCATGCGCGAGGGCTCGGTGCGGGCCCATGGCACGCCCTCCCAGGTGGTCACCGAACCGGTGTTGCGGGAGGTCTTCAAC
CTGGAGACGCGGATCCTCACCGACCCGGTCAACCGGTCCCCCGTCGTCGTGCCCCTGGGCCGGGCCGAGGACCCTTCGAC
GGTCGCCGATCAGGTGGATCTGAGCAGGGCGGCAGCATGA

Protein sequence : 
MTDHTFSAQGVAVGYGERTVIDALDLDIPDHGIGAIIGPNGCGKSTLLRTLARLLRPTTGSVVLDGQAIHSLPTRKVARV
LGLLPQSPTCPEGIAVADLVSRGRAPHRGAFARWTSDDDDAVAEALEQTGTAELAHRPVDELSGGQRQRVWIAMALAQQT
DLLLLDEPTTYLDLAFQIDVLELLGRLNRDHGTTVVMVLHDINMAARYSDWLVAMREGSVRAHGTPSQVVTEPVLREVFN
LETRILTDPVNRSPVVVPLGRAEDPSTVADQVDLSRAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-55 55
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 8e-43 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 8e-56 48
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 8e-56 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-44 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 9e-44 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 9e-44 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-44 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-37 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-37 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-37 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-37 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PACID_27820 YP_006981904.1 ABC transporter related protein BAC0164 Protein 5e-43 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PACID_27820 YP_006981904.1 ABC transporter related protein VFG0925 Protein 7e-54 52
PACID_27820 YP_006981904.1 ABC transporter related protein VFG1042 Protein 4e-43 49