Gene Information

Name : PACID_27800 (PACID_27800)
Accession : YP_006981902.1
Strain : Propionibacterium acidipropionici ATCC 4875
Genome accession: NC_019395
Putative virulence/resistance : Virulence
Product : Transport system permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2924510 - 2925601 bp
Length : 1092 bp
Strand : +
Note : -

DNA sequence :
GTGACCGGGAGCGCCCCAGCGGTCGGCGTCGCGGACCGGCCCGGGACGGCCGACGCCGTAACAGACGTCGCCACCGCCCC
CGGCCCCTCCACGGCGCCCCGCGGGGTGCGCCGTTGGGGCCTGGCCCTCGCCCTGATCGCCCTGCTCGCCGCATGCGCGG
CGTCGGTGGGGATCGGCTCCCGCACCGTCCCCCCGGCGCAGATCTGGCAGGCCCTCACCGACCCGTCGGTGAGCACCATC
GCCGCCGAGGCGGTCCGCTCCCGCGTCCCCCGCACCGTCCTCGGGCTGCTGGTCGGCGCCTCACTCGCGGTCTCGGGAGC
CCTCATGCAGGGCATCACCCGCAATCCGCTGGCCGACCCCGGCATCCTCGGGGTCAACGCCGGCGCCGCGGCCTTCGTCG
TCATCGGGATGGCCTACATCGGCCTGAACTCCGCCGGTCAGTACATCTGGCTGGCGGTCGCCGGAGCGGCCCTGGCCGCA
GCAGCCGTCTGGGCCGTCGGATCCGGGGGACGCGGCCGCCCCAGCCCGCTGCGTCTGGCCCTGGCCGGGGCGGTGATGGC
CGCCGTCCTCACCAGCATCACCCAGGCCGTGCTGCTGCCGCGCGCCGAGATGCTGCAGTCCTTCCGCACCTGGCAGGCCG
GCGGCATCGAGGGGGCCCGCTTCGACCAGATGACCGGGGTGCTGCCCTTCTTCCTGGTCGGGGCGGTTCTGGCGGTCTTC
TCGGGCCGGGCACTGAACTCCCTGGCACTGGGCGACGAGATGGCGTCGGGGCTGGGCCTGAGCGTCGGACGCACCCGGCT
GCTGGTGGCCTGCGCCGCAGTGCTGCTGGCGGCCGCCTCCACGGCGCTGGCCGGGCCGATCGGCTTCGTCGGGCTCATCG
TGCCGCACGCCGTGCGCGCCGTCGTGGGCGCCGACAACCGGTGGGTGCTGGCCTGGTCGGTGGTCGTCGGCCCGCTCCTG
CTGCTGGTGGCCGACGTCGTGGGCCGGGTCGTCACCCGCCCCACCGACATCCAGGTCGGCATCGTCATGGCGATCATCGG
CGCGCCGGTGTTCATCGTGCTGGTGCGCAACCGCAAGTTCGCGGAGCTGTGA

Protein sequence :
MTGSAPAVGVADRPGTADAVTDVATAPGPSTAPRGVRRWGLALALIALLAACAASVGIGSRTVPPAQIWQALTDPSVSTI
AAEAVRSRVPRTVLGLLVGASLAVSGALMQGITRNPLADPGILGVNAGAAAFVVIGMAYIGLNSAGQYIWLAVAGAALAA
AAVWAVGSGGRGRPSPLRLALAGAVMAAVLTSITQAVLLPRAEMLQSFRTWQAGGIEGARFDQMTGVLPFFLVGAVLAVF
SGRALNSLALGDEMASGLGLSVGRTRLLVACAAVLLAAASTALAGPIGFVGLIVPHAVRAVVGADNRWVLAWSVVVGPLL
LLVADVVGRVVTRPTDIQVGIVMAIIGAPVFIVLVRNRKFAEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 1e-32 42
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 1e-32 42
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 3e-16 41
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 3e-16 41
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 3e-16 41
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 3e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PACID_27800 YP_006981902.1 Transport system permease protein VFG0926 Protein 2e-24 44