Gene Information

Name : amad1_21393 (amad1_21393)
Accession : YP_006979071.1
Strain :
Genome accession: NC_019394
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 131427 - 132794 bp
Length : 1368 bp
Strand : +
Note : COG1061 DNA or RNA helicases of superfamily II

DNA sequence :
ATGAGATTGGGAAATTGGCAGCAAAGAGCTATTGAAACCGCTCTACAAAAATTTAAATCGCCATTTACTAATTTTTTATG
CCTTGCAACGCCAGGTGCAGGAAAGACTGTCATGGCATCTGCACTTGCGGATATCCTCCTAAAGCAAGATAAAGTCGACT
TCGTTTTATGCTTTTCTCCGTCGACTGTCGTAGCAAATGACTTTAGAGTTGAACTTGAAGCGATTACTGGAAAACGTTTT
TGTGGTGGACTTGGCGCAATAGGTTCATCACTGACTTACCAAAGTATGAGGCATTTGGACGATACGTTTTGGCAGCTTTT
GAGTAGCTACCGAGTGTTTGTGATTTTTGATGAAATACATCACTGTGCAGGTAACCAAATTGAAAATGCCAATGCCTGGG
GGGCAGAGATTTTAAAGCATATTCAAGGGCGAGCAGTTTATACCATAGCGTTGACCGGAACTCCTTGGAGAAGCGACACT
ATTCCCATTGCTCTTGCAAATTACGTAGGTGAGCATGGTCGTTTACACGTAGATTACAGCTATGATCTAAAGCAGGCTAT
CAAAGATGGCGTTTGTCGCGTTCCGCATCTCACTTTGTTAGATAACGAGCTTATTACTGTTATTGAGGATGGCGGTAAAG
AAAATTTTCAATCGATAACCAAGTTTTTAGAAGATAGTTCCCTTCCATACTCAGAAATCATTTTCCATGATGAGGTTTTA
CGGGAAACTCTGGAGCGTGGGATTATTCGATTGAACAAAGAACGATTAATTGCTGAAGATGCAGGAGGCTTAATCGTTGC
ATCATCGATCTCTCACGCTAAAAAAATCCAATATTTGTTAAGTCAACTTGGTGAATATAGCAAAGTTGTGACATACCAAG
AAAGTGAACCAGAACGGTTGATTCAAAATTTCAAAAGAAGTAATGAAAAATGGATTATCTCGATTGGCATGATAAGCGAA
GGAACAAATATTCCCCGCTTACGAGTCTGTTGCTATCTCTCACTAGTAACAACTGAACTCTACTTCAGGCAGGTGTTGGG
GCGAGTTTTAAGAGCGCAAAATAATGATCGCGAAATGGGGTATTTTATCACTCCAGCGCACCCTCGCTTACTCGAATTTG
CAAGTAGAGTTGCTGAAGAAGTACCACATTGTGCAGTTCTGAACTCTTCAAATATAGATGATTTGGATTCTATGAGGTCA
AGCGTATTAATTGGTGACTCTTCTCTATGCTTCAATCCACAAGTAATTACTAAAACCGTTGCCGAAAAGGAGTTCGATGA
GGGTCTCGGCAACGACTTGCTTCCTTTGTGGTACGACTCGACGATAGACTCATTTGGTCGCTTCCGGCAAAAAGTTTTCA
TGTTGTAA

Protein sequence :
MRLGNWQQRAIETALQKFKSPFTNFLCLATPGAGKTVMASALADILLKQDKVDFVLCFSPSTVVANDFRVELEAITGKRF
CGGLGAIGSSLTYQSMRHLDDTFWQLLSSYRVFVIFDEIHHCAGNQIENANAWGAEILKHIQGRAVYTIALTGTPWRSDT
IPIALANYVGEHGRLHVDYSYDLKQAIKDGVCRVPHLTLLDNELITVIEDGGKENFQSITKFLEDSSLPYSEIIFHDEVL
RETLERGIIRLNKERLIAEDAGGLIVASSISHAKKIQYLLSQLGEYSKVVTYQESEPERLIQNFKRSNEKWIISIGMISE
GTNIPRLRVCCYLSLVTTELYFRQVLGRVLRAQNNDREMGYFITPAHPRLLEFASRVAEEVPHCAVLNSSNIDDLDSMRS
SVLIGDSSLCFNPQVITKTVAEKEFDEGLGNDLLPLWYDSTIDSFGRFRQKVFML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13515.1 type III restriction enzyme Not tested PAGI-7 Protein 2e-93 45