Gene Information

Name : amad1_04410 (amad1_04410)
Accession : YP_006975761.1
Strain : Alteromonas macleodii AltDE1
Genome accession: NC_019393
Putative virulence/resistance : Unknown
Product : transposase subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 982304 - 983050 bp
Length : 747 bp
Strand : +
Note : COG1484 DNA replication protein

DNA sequence :
ATGACACAATCTCAATTACAAGAGCAACTGCGTAGCTTACGGCTTGGACACTTCGCTCAAGCGTTACTGCAACAACAAAG
CCAAGCGACAACCTACGACGAGATGAGCTTCGAAGAACGCTTAGGATTACTGGCACAGCATGAAATCCACTGTCGGCAAG
ACAGCAAAGTGAAGCGTTTACTGCGTCAGGCAACCTTGCGCTTAGAAGCTCACGCCAGCCGATTGGAATACCGCGCAGAG
CGCGGTCTACGCAAAGATAAAGTCGCCACACTGTTGAGCGGCCAATACTTACATCATGCCCATAACATTATCGTTACTGG
CGCAACGGGGTGCGGTAAAACGTACTTCGCTTGCGCATTAGCCAGACAAGCCTGTGAACAGCATCATACAGTACGATATT
ACCGGCTCGGCCAGCTTCTAGATGAGCTGAATATCGGCCACGCCGATGGAAGTTACCGACAACAGCTTGCACAACTCGCT
AAGAAAGAGCTGCTCATCCTAGATGACTGGGGAATGGAAAAACTGAGTGCAAGACAGGCCAATGACTTACTTGACGTGAT
GGAAGAACGATATCAAAACACCAGCACCATTATCGCTAGCCAGTTGCCCGTTACCGAATGGTACAAACTCATCAGTAACC
CCACCGTGGCAGATGCATTACTCGACCGTTTACTGCACAACAGCCATCGAATTGAACTGGCTGGCGAATCGATGAGAAAA
CTAGACCAATCCGATCACTTAAGGTAA

Protein sequence :
MTQSQLQEQLRSLRLGHFAQALLQQQSQATTYDEMSFEERLGLLAQHEIHCRQDSKVKRLLRQATLRLEAHASRLEYRAE
RGLRKDKVATLLSGQYLHHAHNIIVTGATGCGKTYFACALARQACEQHHTVRYYRLGQLLDELNIGHADGSYRQQLAQLA
KKELLILDDWGMEKLSARQANDLLDVMEERYQNTSTIIASQLPVTEWYKLISNPTVADALLDRLLHNSHRIELAGESMRK
LDQSDHLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0004c ACA01821.1 IstB protein Not tested VPI-2 Protein 2e-60 63
APECO1_3529 YP_854246.1 ISEc12 ATP-binding protein Not tested PAI I APEC-O1 Protein 5e-47 50
unnamed CAC39295.1 hypothetical protein Not tested LPA Protein 3e-47 50
ORF_5 AAZ04416.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 3e-47 50