Gene Information

Name : amad1_04065 (amad1_04065)
Accession : YP_006975694.1
Strain : Alteromonas macleodii AltDE1
Genome accession: NC_019393
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 903607 - 905598 bp
Length : 1992 bp
Strand : +
Note : COG0021 Transketolase

DNA sequence :
ATGCCCTCTCGTCGTGAACTCGCCAATGCTATCCGTGCACTAAGCATGGATGCTGTTCAACAAGCTAAATCAGGTCACCC
AGGCGCCCCAATGGGGATGGCTGACATCGCGCAGGTACTATGGGGTGATTTCTTATCACACAATCCTGCTAACCCGTCTT
GGGCTAACCGCGATCGCTTTGTGCTTTCAAATGGTCACGGCTCGATGCTGTTGTATTCTTTGCTTCACCTTTCAGGCTAC
GAACTGCCTATTGAAGAGTTAAAGAACTTCCGTCAGCTTCACTCTAAAACCCCAGGCCACCCAGAGTATGGCTATGCGCC
AGGTGTTGAAACTACTACTGGCCCGCTAGGTCAGGGTATTAGCAATGCAGTGGGTATGGCGCTTGCTGAAAAAGTGCTAG
CAGCACAATTCAACAAAGACGGTCACACTATTGTTGATCATCACACCTATGCATTCTTAGGCGACGGCTGCTTGATGGAA
GGTATCTCTCATGAGACGTGTTCACTAGCCGGTACGCTTGGTCTTGGTAAGCTCATCGCATTTTGGGACGACAACGGCAT
TTCAATTGACGGTGAAGTAGAAGGTTGGTTCACCGACGACACACCAGCGCGCTTCAAGAGCTACGGCTGGGAAGTGATTG
AAGGTGTTGACGGTCACGATGCTGAGCAAGTGAAAGCCGCAATCGAAAAAGCGCAAGCGAATACAACGCAACCAACGCTA
ATTTGCTGTAAAACCACCATTGGATTTGGTTCGCCTAATAAAGAAGGTACTGAGTCTTGCCACGGTGCACCGCTTGGCGA
TGATGAAATTGTTGCTACGCGTGAGAAGCTTGGTTGGAGCCACGGCGCATTTGAAATTCCAGACGATATCTACGCGGGCT
GGGATGGTAAAGACAAAGGCTCAAAAGCGGAAAGCGCGTGGAACGATGCTTTCGCAGCATACGAAGCCGCTTATCCAGAG
CTTGCAGCAGAATTCAAACGCCGTGTAAATGGCGAACTGCCAGCAGATTTCAGCGACAAAGCAGACGCTATCATCGCTGA
ACTTCAAGCTAACCCACAAAACATTGCTTCGCGTAAAGCGTCGCAAAATGCGCTAAACGCATTTGGTCCGCTGCTACCTG
AGCTATTAGGTGGCTCTGCCGACCTTGCAGGTTCTAACCTGACTATTTGGGAAGGCAGTAAAGGTGTTGAAGCGAACGAT
GCATCAGGTAACTACATATACTACGGTGTGCGTGAGTTTGGTATGTCTGCCATGATGAACGGTATTACCCTTCACGGTGG
CTTTAAAGCTTACGGCGCAACCTTCCTAATGTTTATGGAATATGCACGTAATGCGGTACGCATGGCGGCGCTTATGAAGC
AGCCTGCTATTTTCGTTTATACCCACGACTCGATTGGTCTGGGTGAAGACGGCCCAACTCACCAGCCGGTGGAGCAGGTG
GTTGCGCTACGTGCAACGCCTAACCTTGATAACTGGCGCCCTTGTGATCAGGTTGAGTCTGCTGTGTCGTGGAAGTCTGC
CATTGAGCGCACTGACGGCCCAACAACACTAATCTTCACACGTCAAGGCTTAGCGCAGCAAGAAAGAACGGCTCAACAAG
TGGCTGATATCGCGAAAGGCGGTTACGTACTTAAAGACTGTGAAGGTACGCCAGAGCTTATTCTTATCGGTACTGGTTCT
GAGGTTCAGCTAGCCGTTGAAGCCGCAGCCAAACTAACCGAGCAAGGCAAAGCCGTTCGCGTAGTATCTATGCCATCTAC
TGATGTTTTTGATCGTCAGTCGGCTGACTACCGAGAAAGCGTACTGCCGTCTAGTGTTGTAAAACGCGTAGCGGTTGAAG
CCTTGTCTAAAGACAGCTGGTACAAGTACGTTGGCTTTAACGGCGCTATCGTAGGTATGGACACCTTTGGTGAGTCTGCA
CCTGCAGGCGACCTATTTAAGCACTTCAACATTACCACTGACGCTGTAGTAGAGGCTGCACTGTCTCTGTAA

Protein sequence :
MPSRRELANAIRALSMDAVQQAKSGHPGAPMGMADIAQVLWGDFLSHNPANPSWANRDRFVLSNGHGSMLLYSLLHLSGY
ELPIEELKNFRQLHSKTPGHPEYGYAPGVETTTGPLGQGISNAVGMALAEKVLAAQFNKDGHTIVDHHTYAFLGDGCLME
GISHETCSLAGTLGLGKLIAFWDDNGISIDGEVEGWFTDDTPARFKSYGWEVIEGVDGHDAEQVKAAIEKAQANTTQPTL
ICCKTTIGFGSPNKEGTESCHGAPLGDDEIVATREKLGWSHGAFEIPDDIYAGWDGKDKGSKAESAWNDAFAAYEAAYPE
LAAEFKRRVNGELPADFSDKADAIIAELQANPQNIASRKASQNALNAFGPLLPELLGGSADLAGSNLTIWEGSKGVEAND
ASGNYIYYGVREFGMSAMMNGITLHGGFKAYGATFLMFMEYARNAVRMAALMKQPAIFVYTHDSIGLGEDGPTHQPVEQV
VALRATPNLDNWRPCDQVESAVSWKSAIERTDGPTTLIFTRQGLAQQERTAQQVADIAKGGYVLKDCEGTPELILIGTGS
EVQLAVEAAAKLTEQGKAVRVVSMPSTDVFDRQSADYRESVLPSSVVKRVAVEALSKDSWYKYVGFNGAIVGMDTFGESA
PAGDLFKHFNITTDAVVEAALSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 0.0 73
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 0.0 64