Gene Information

Name : amad1_03930 (amad1_03930)
Accession : YP_006975667.1
Strain : Alteromonas macleodii AltDE1
Genome accession: NC_019393
Putative virulence/resistance : Virulence
Product : arabinose 5-phosphate isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 872441 - 873421 bp
Length : 981 bp
Strand : -
Note : COG0794 Predicted sugar phosphate isomerase involved in capsule formation

DNA sequence : 
ATGAATACACAAACTCAGATGAACTATATCGACTCGGCGAAGCGCGTTATTGAAATTGAAACGCAGGCCATTGCCAATTT
AAGTGAGCGCTTAAACGACGACTTTATTACAGCCTGCGATATTCTTTTTGCCTGTCAGGGAAAGGTTGTGGTTTGCGGTA
TGGGGAAATCTGGGCATATAGGTAATAAAATTGCCGCCACGCTGGCTAGCACAGGTACACCTGCTTTTTTTATGCACCCT
GGTGAAGCCAATCACGGCGACCTAGGAATGTTGGGCAAAGGCGATGTTTTATTAGCCATATCCAACTCTGGTGAAACCAA
TGAGCTTGTAAACTTATTGCCTGTAGTCAAACGCTTAGGTATTCCAGTGGTAGCCATGACCAACAGTGCTTCAAGCTCGC
TAGGGCAGCATGCTGATGTCATCCTTGATATTAGCGTTGAGAAAGAAGCCTGTTCACTTGGTCTAGCTCCAACTACTAGC
ACCACGGCTACATTAGTAATGGGGGATGCGCTTGCCGTTGCGTTACTTGACCAGAAAGGGTTCACGTCTGATGATTTTGC
GTTATCACACCCTGGGGGAAGCTTAGGGCGTAAACTGTTGCTTAAGGTGCGAGACATCATGCTAACTGGCAGTGATATTC
CGCTTATCGAGTTAAACGCATCGGTGGCTGATGCTTTGCTCGAAATTTCTAAAAAAGGGCTAGGAATGACTGGGGTGCTT
GACACTGATGGTACCCTAACAGGCGTATTTACTGACGGTGATCTACGGCGCATTTTAGATGCTCGCATTGACGTACATAG
CGCAACCGTCGAAAGTGTTATGACCAAAGGCGGTAAAACAACCACAGCCGAACAACTTGCTGTCGAAGCATTAAACTTAA
TGGAAACTCATAAGATTAGTGCATTAATGGTCACGGATAACGAGCACAAACCAGTGGGCGCGTTTAACATGCATATGCTA
CTTAAAGCTGGAGTGCTATAA

Protein sequence : 
MNTQTQMNYIDSAKRVIEIETQAIANLSERLNDDFITACDILFACQGKVVVCGMGKSGHIGNKIAATLASTGTPAFFMHP
GEANHGDLGMLGKGDVLLAISNSGETNELVNLLPVVKRLGIPVVAMTNSASSSLGQHADVILDISVEKEACSLGLAPTTS
TTATLVMGDALAVALLDQKGFTSDDFALSHPGGSLGRKLLLKVRDIMLTGSDIPLIELNASVADALLEISKKGLGMTGVL
DTDGTLTGVFTDGDLRRILDARIDVHSATVESVMTKGGKTTTAEQLAVEALNLMETHKISALMVTDNEHKPVGAFNMHML
LKAGVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 2e-54 44
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 1e-54 44
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 4e-54 44