Gene Information

Name : amad1_03710 (amad1_03710)
Accession : YP_006975623.1
Strain : Alteromonas macleodii AltDE1
Genome accession: NC_019393
Putative virulence/resistance : Unknown
Product : tyrosine recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 832340 - 833266 bp
Length : 927 bp
Strand : +
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGGCAAAAACAAAGCGTGAGTTAACCTATGTGCCGCCAGCAAGTCAGGCACATATTGATGGCTTTATCGAAATGCTATG
GCTGGAAAAGGGCTTATCAGAGCACACGCAGCAAAGCTACCGTACTGACCTTAGTAAGCTTGCTGTTTTCAGCAACAACC
AAGGCGTAAAAGACATCGCAGTGCTGAGTACTGAACAGCTTCAAGACTACCTTGCTTATCGCCATGATAAAGGCTTATCT
ACCCGCAGTACTCAACGCGCGCTAAGCGCTATTCGCGCCTTCTTTGTTTACCTTATTAGTAAGCAGATAAGAGTGGACAG
CCCGGTCTCTGCCTTGTCGAACCCGAAAACACCTAAAGCGTTACCTGCTTCACTTAGTGAACAGCAGGTAGAAGATTTGC
TTAATGCCCCCCAAACCGACGACCCCATTGAATGCAGAGATAGAAGCATGCTTGAAGTGCTATACGCTACTGGACTTCGA
GTCAGTGAACTTATCGGTTTAACGATGGACCAGATAAGCCTTCAGCAAGGTGTGGTACGGGTGGTAGGCAAAGGTAATAA
AGAGCGTTTAGTTCCGCTAGGTGAGGAAGCCATAGAATGGCTGCTTACCTATATCAAAACAGCGCGACCTATACTCGCCA
CTAAAACCTCTGATTTTGTGTACCTCAGTAAGCGGGGCCAAAAGATGACGCGGCAAACTTTTTGGCATCGCATTAAATAT
TATGCAGTAAAGGCGGGAATAGAGCAGCACTTGTCTCCTCACACCCTAAGACATGCTTTCGCCACGCATTTGCTCAACCA
CGGGGCTGATTTGCGAGTGGTTCAAATGTTGTTGGGACATAGCGACCTATCGACTACTCAAATATACACGCACGTAGCCA
CTGAAAGGTTGCAAACGTTGATTCACAGTCATCACCCTAGGGGCTAA

Protein sequence :
MAKTKRELTYVPPASQAHIDGFIEMLWLEKGLSEHTQQSYRTDLSKLAVFSNNQGVKDIAVLSTEQLQDYLAYRHDKGLS
TRSTQRALSAIRAFFVYLISKQIRVDSPVSALSNPKTPKALPASLSEQQVEDLLNAPQTDDPIECRDRSMLEVLYATGLR
VSELIGLTMDQISLQQGVVRVVGKGNKERLVPLGEEAIEWLLTYIKTARPILATKTSDFVYLSKRGQKMTRQTFWHRIKY
YAVKAGIEQHLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLQTLIHSHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 9e-65 50
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 9e-65 50