Gene Information

Name : amad1_02360 (amad1_02360)
Accession : YP_006975357.1
Strain : Alteromonas macleodii AltDE1
Genome accession: NC_019393
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 529096 - 530571 bp
Length : 1476 bp
Strand : +
Note : COG0753 Catalase

DNA sequence :
ATGAGTAAGTGTCCATTTTCAGGTACAGCCATAAACCCTACCACGCTAACGTCTAGCAATGGTGCGCCCGTTGCTAATGA
CAACCAAAGTCGCACCGCCGGACCTCGTGGCCCTGTTACTTTCGACAACCACTATTTATTCGAGAAGCTTGCGCACTTTA
ACCGCGAGCGCATTCCTGAACGCGTAGTTCACGCTAGAGGTAGTGCAGCGTATGGTACTTTTACGCTTACTAAGAGTTTA
TCCGATTACACCATTGCCGACTTTCTTCAGCAAGAAGGACAGCAAACTAACGTCTTTCTACGTTTCTCTACAGTAGGTGG
TGGTCAAGATTCAAGCGACTACGCTCGCGACCCCCGTGGTTTTTCTGTGAAGTTTTACACCGAACAGGGCAACTGGGATA
TGGTGGGCAATAATACGCCAGTGTTTTTCTTGCGAGATGGCATTAAGTTCCCTGATTTTATACACAGCCAGAAAAAGAAC
CCGCGAACTAACTTACCAGATCCGCAGGCGGTATATGAGTTTTGGGCGAACAATCCGCAGTCATTACACCAATCAACAAT
TTTGATGTCAGATCGTGGTATTCCGCTGTCTTATCGCCACGTGAACGGCTACAGCTCTCATACATTGAGTTTATGGAATA
AAGCCGGTGAGCGCTATTGGGTGAAGTGGCACTTTAAAACTAATCAAGGCATCAAAACGTTAACGAATGAAGAAGCGGCG
AAAATGCCTGCTTACGGTGCGCAGCAAGACCTTGTTGAAAGCATTGATAACGGTGACTTTCCATCTTGGACTGTAAACGT
TCAAATTATGACGGAAGAAGAAGCGCGTAATTACCGTATTAACCCGTTTGACTTAACAAAGGTATGGCCACACAGCGACT
TCTCGTTGATTGAAGTGGGGCAACTGGAGTTAAATCGCAATGTGGAAAATTATTTTGCAGAAACAGAGCAAGCAGCGTTT
GCGCCGAGCAATTTGGTACCGGGTATTGGCGTGTCGCCAGACAGGATGCTACAAGCGCGACTAATTGGATATCAAGATGC
GCACAGGTACCGTATTGGCGCTAATTACAACCAAATACCGGTAAATGCGCCACGCTGTCCAGTGCACAATTATCAGCGTG
ACGGTGCGTTTGCAGGCGTTAATCCAGCACTTGCGGGAAGTGGAGCAAACTTCTATCCAAATAACCGTGCGCGAGTTGGT
GAGCCAGCCGAAGCGCCAGAAGTACAAGAGCCACCAATGCCGCTAGAGCAAGATGCATGGTTAGATATTTATGATAACCG
TGATGAAGACAACTACTCCCAGGCAGGCGATTTGTACCGCATTATGAGTGAAGATCAGAAACAGCAGTTGGTAAACAATA
TTGCTGATGGTCTAAGCCAAGCTACACAAGACGTGCAAGAAGCTATGTTCGTGCAATACGACTTAGCCGATAAAGACTAC
GGCGCCCGTGTAAGAAAGGCGGTAGCCAGCAGATAG

Protein sequence :
MSKCPFSGTAINPTTLTSSNGAPVANDNQSRTAGPRGPVTFDNHYLFEKLAHFNRERIPERVVHARGSAAYGTFTLTKSL
SDYTIADFLQQEGQQTNVFLRFSTVGGGQDSSDYARDPRGFSVKFYTEQGNWDMVGNNTPVFFLRDGIKFPDFIHSQKKN
PRTNLPDPQAVYEFWANNPQSLHQSTILMSDRGIPLSYRHVNGYSSHTLSLWNKAGERYWVKWHFKTNQGIKTLTNEEAA
KMPAYGAQQDLVESIDNGDFPSWTVNVQIMTEEEARNYRINPFDLTKVWPHSDFSLIEVGQLELNRNVENYFAETEQAAF
APSNLVPGIGVSPDRMLQARLIGYQDAHRYRIGANYNQIPVNAPRCPVHNYQRDGAFAGVNPALAGSGANFYPNNRARVG
EPAEAPEVQEPPMPLEQDAWLDIYDNRDEDNYSQAGDLYRIMSEDQKQQLVNNIADGLSQATQDVQEAMFVQYDLADKDY
GARVRKAVASR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 3e-109 52
katA YP_005126717.1 catalase Not tested Not named Protein 2e-89 44
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 3e-87 43
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 3e-87 43
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 3e-87 43
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 3e-87 43