Gene Information

Name : amad1_20115 (amad1_20115)
Accession : YP_006978851.1
Strain : Alteromonas macleodii AltDE1
Genome accession: NC_019393
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4556261 - 4556974 bp
Length : 714 bp
Strand : -
Note : COG0689 RNase PH

DNA sequence :
ATGCGTCCAAGCGGCAGAACCGCCAGTCAAATTCGCCCCGTTACTATTACTCGCCAATACACTTGTCATGCAGAAGGCTC
TGTTCTTGTAGAGTTTGGTAACACCAAGGTGTTGTGTAATGCGACGGTGGAAGAAGGTGTACCACGCTTTATGAAAGGCC
AAGGCAAAGGTTGGGTGACGGCGGAATACAGTATGCTTCCGCGCGCAACTCATACTCGCAGCGGTCGTGAAGCCGCACGC
GGTAAGCAAGGTGGCCGTACGTTAGAAATTCAGCGTCTCATCGCTCGTTCACTTCGCGCTGCACTTGACCTAAAATTACT
GGGTGAAAACACCATCACGCTTGATTGCGACGTTATCCAAGCAGATGGCGGTACCCGCACAGCCTCAATTACCGGCGCAT
GTGTTGCCTTAGTTGATGCGCTTACATACATGCGCAGCAAAGGTATTATTAAAACAAACCCACTTAAGCACATGATTGCT
GCGCTATCAGTCGGTATTTACGAAGGTACACCCATTGCTGACCTTGAGTATACAGAAGATTCTGAAGCTGAAACCGATAT
GAACATTGTAATGACAGAGACAGGTAAGCTTATCGAAGTGCAAGGCACTGCTGAGGGCGAACCTTTCTCGTTTGAAGAAC
TTGATGAGCTGTTGAAAATTGGTAAGCACGGTCTACGTGAACTATTCGATATTCAAAAAGCAGCCTTGGCGTAA

Protein sequence :
MRPSGRTASQIRPVTITRQYTCHAEGSVLVEFGNTKVLCNATVEEGVPRFMKGQGKGWVTAEYSMLPRATHTRSGREAAR
GKQGGRTLEIQRLIARSLRAALDLKLLGENTITLDCDVIQADGGTRTASITGACVALVDALTYMRSKGIIKTNPLKHMIA
ALSVGIYEGTPIADLEYTEDSEAETDMNIVMTETGKLIEVQGTAEGEPFSFEELDELLKIGKHGLRELFDIQKAALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-64 56