Gene Information

Name : amad1_19555 (amad1_19555)
Accession : YP_006978741.1
Strain : Alteromonas macleodii AltDE1
Genome accession: NC_019393
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4430590 - 4431027 bp
Length : 438 bp
Strand : +
Note : COG2165 Type II secretory pathway, pseudopilin PulG

DNA sequence : 
ATGAAAACACTTAATCGCAGTTCTGGTTTCAGTTTGATTGAAGTCATGGTCGTACTTCTAATCATCGGTATTATGGCCTC
TATGGTTGCACCGCAAATCTTGGGTAACCAAGAAGAAGCGCAGCTTAAAAAAGCCGCTGTTGATATACAGCAAATGGAAA
GTGCGCTTGAAATGTACAAGCTTCGCAACAACCGCTTCCCAACCACTGAGCAAGGCTTAGACGCCCTGGTAACCGCACCT
ACCATCGACCCAATTCCACGCAACTACCCTGAAGGCGGCTTTATCAAGCGTTTACCTGAAGATCCGTGGGGCAACCCTTA
CGCGCTAATTAGCCCGGGAGAGCTTGGCGTAGTCGATATTTTCTCAAACGGTCCAGACGGTGAGCCAGGCACTGATGATG
ATATTGGTAACTGGAATATCAACGAGTATTTGAACTAA

Protein sequence : 
MKTLNRSSGFSLIEVMVVLLIIGIMASMVAPQILGNQEEAQLKKAAVDIQQMESALEMYKLRNNRFPTTEQGLDALVTAP
TIDPIPRNYPEGGFIKRLPEDPWGNPYALISPGELGVVDIFSNGPDGEPGTDDDIGNWNINEYLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 4e-35 52
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-35 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
amad1_19555 YP_006978741.1 general secretion pathway protein G VFG2050 Protein 9e-36 52
amad1_19555 YP_006978741.1 general secretion pathway protein G VFG1871 Protein 2e-29 48
amad1_19555 YP_006978741.1 general secretion pathway protein G VFG0180 Protein 1e-30 47