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Name : amad1_19545 (amad1_19545) Accession : YP_006978739.1 Strain : Alteromonas macleodii AltDE1 Genome accession: NC_019393 Putative virulence/resistance : Virulence Product : type II secretory pathway, ATPase PulE-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 4427804 - 4429363 bp Length : 1560 bp Strand : + Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGGCGGATGAACAACTTACTCAAGCACTAGAGGCCCAAGAAGAAGCCCTAGAAGCCATGGGTGATGACGCCGGCGTACC TGAAGCAGAGGCCGGCCCTAAGCAGCTCTCTTTTAGCTTTGCTAAGCGCAACCAGGTGCTGCTTGAAACCAACGAAACGC CAGCGGTGCTGTATTTTACAGAAAACACGCCGTTTGACGTGTTTGCAGAAGTGCGTCGCTTCTACGGCGAGCCTTTTGTA CCGAAAACTATACCCGCTGACGAATTTGAAAACTTACTGACTAGTGCGTTTCAGCGCGATAGTTCTGCAGCGAAGCAGTT AATGGAAGACTTAGGCAACGAAAGCGACTTATTCGCCCTTGCAGAAGACTTACCCGACACTGAAGACCTGCTAGATAGCG AAGACGACGCCCCTATTATCAAGCTTATTAACGCCATGCTAGGTGAGGCAATTAAAGAAGGCGCGTCAGATATTCATATC GAAACGTTTGAAAACCAGCTTGTGGTTCGCTTTCGGGTAGACGGTGTGTTGCGGGAAATTTTGCGCCCCAATCGCAAGCT TAGCTCTATGCTGGTATCGCGTATAAAAGTAATGGCCAAGCTAGATATTGCAGAAAAACGCGTCCCCCAGGATGGCCGTA TTACGCTGCGTATTGCCGGGCGAGCGGTAGACGTTCGTGTTTCGACGATGCCCTCTAGCCACGGCGAGCGAGTGGTACTG CGTCTTTTAGACAAAAACAACGCCCGCTTGAACCTAGAAGATTTGGGCATGACGCTGCAAAACCGTAACCATTTCTCGAC GTTAATACGAAAACCACACGGTATTATTTTGGTTACTGGCCCTACCGGTTCCGGTAAAAGTACCACCTTGTACGCAGGGC TTACCGAGATAAACTCCCGCGATAGGAATATTTTAACGGTAGAAGATCCTATCGAATTCGACCTGCCAGGCATCGGACAA ACGCAGGTTAACCCCCGTGTAGACATGACCTTTGCACGAGGCCTTCGCGCAATTTTGCGTCAAGACCCCGATGTTGTCAT GGTCGGTGAGATTCGTGATATCGAGACTGCGCAAATTGCCGTTCAGGCCAGTTTAACCGGTCACTTAGTGCTTTCTACCC TGCATACTAACACCGCCGCTGGCGCCATTACTCGCTTAGAAGACATGGGCATAGAGCCTTTCCTTTTATCTTCCAGTTTA TTGGCAGTACTGTCACAGCGACTCGTTCGTACGCTATGCCCAGACTGTAAAAAGCCGCATACGCCGGATGCGTCTGAACT TGAAATATTAGGCCAAGGGGCCACCAGCAGCACCACAATTTACAAACCTCACGGCTGTGCAGCGTGTAACCAGACCGGCT ATCGCGGGCGTACGGGTATTCACGAATTGCTTTTAGTTGATGAAAAAGTGCGTGAAATGATGCACGAAGGTGTCGGCGAA CAAGCCATTGAGCGCTACATCAGAACCTCTACCCCAAGCATCCGTGAAGATGGCTGTAGTAAAGTGCTTATCGGTGAAAC CTCTCTTGAAGAAGTGCTTCGAGTAACGAGGGAAGACTAG Protein sequence : MADEQLTQALEAQEEALEAMGDDAGVPEAEAGPKQLSFSFAKRNQVLLETNETPAVLYFTENTPFDVFAEVRRFYGEPFV PKTIPADEFENLLTSAFQRDSSAAKQLMEDLGNESDLFALAEDLPDTEDLLDSEDDAPIIKLINAMLGEAIKEGASDIHI ETFENQLVVRFRVDGVLREILRPNRKLSSMLVSRIKVMAKLDIAEKRVPQDGRITLRIAGRAVDVRVSTMPSSHGERVVL RLLDKNNARLNLEDLGMTLQNRNHFSTLIRKPHGIILVTGPTGSGKSTTLYAGLTEINSRDRNILTVEDPIEFDLPGIGQ TQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDIETAQIAVQASLTGHLVLSTLHTNTAAGAITRLEDMGIEPFLLSSSL LAVLSQRLVRTLCPDCKKPHTPDASELEILGQGATSSTTIYKPHGCAACNQTGYRGRTGIHELLLVDEKVREMMHEGVGE QAIERYIRTSTPSIREDGCSKVLIGETSLEEVLRVTRED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-151 | 65 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-151 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| amad1_19545 | YP_006978739.1 | type II secretory pathway, ATPase PulE-like protein | VFG0182 | Protein | 6e-144 | 65 |
| amad1_19545 | YP_006978739.1 | type II secretory pathway, ATPase PulE-like protein | VFG2048 | Protein | 3e-150 | 64 |
| amad1_19545 | YP_006978739.1 | type II secretory pathway, ATPase PulE-like protein | VFG1876 | Protein | 1e-130 | 57 |
| amad1_19545 | YP_006978739.1 | type II secretory pathway, ATPase PulE-like protein | VFG2426 | Protein | 2e-72 | 48 |
| amad1_19545 | YP_006978739.1 | type II secretory pathway, ATPase PulE-like protein | VFG1880 | Protein | 1e-79 | 45 |
