Gene Information

Name : amad1_18575 (amad1_18575)
Accession : YP_006978547.1
Strain : Alteromonas macleodii AltDE1
Genome accession: NC_019393
Putative virulence/resistance : Unknown
Product : transcription termination/antitermination factor NusG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4211740 - 4212291 bp
Length : 552 bp
Strand : -
Note : COG0250 Transcription antiterminator

DNA sequence :
ATGTCTGAAGAAGAAGCAGTAAAGAAAAGATGGTACGTAGTACAAGCCTATTCGCAATACGAAGCTCGCGTTAAAAAGAC
GTTGCTTGAATACATTAAAATGCACAACATGGAAGACTACTTCGGTCAGGTACTAGTACCAACTGAAGAAGTTGTTGAAA
TGCGTGCAGGTCAAAAGCGTAAATCTGAGCGTAAATTTTACCCGGGTTACGTATTGGTAGAAATGGCGATGACGGAAGAG
TCATGGCACTTAGTGAAAAGCGTACCTCGCGTACTCGGTTTCATCGGCGGCACCTCTGACCGTCCTATGCCAATTACGCA
GAAAGAAGCAGACGCTATCCTAAATCGTCTTGAAGAAAACGTTGATAAGCCAAGACCGAAAACATTGTTCGAGCCAGGCG
AAGTGGTTCGCGTTACCGACGGTCCATTTGCCGACTTCAATGGTGTGGTAGAAGAAGTAGACTACGAAAAGAGCCGCGTA
AAAGTATCGGTACTTATCTTCGGTCGTTCTACACCAGTAGACCTAGAATTTGGTCAGGTAGAAAAAGGCTAA

Protein sequence :
MSEEEAVKKRWYVVQAYSQYEARVKKTLLEYIKMHNMEDYFGQVLVPTEEVVEMRAGQKRKSERKFYPGYVLVEMAMTEE
SWHLVKSVPRVLGFIGGTSDRPMPITQKEADAILNRLEENVDKPRPKTLFEPGEVVRVTDGPFADFNGVVEEVDYEKSRV
KVSVLIFGRSTPVDLEFGQVEKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 5e-56 62
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 5e-56 62