Gene Information

Name : amad1_16510 (amad1_16510)
Accession : YP_006978140.1
Strain : Alteromonas macleodii AltDE1
Genome accession: NC_019393
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3717171 - 3718688 bp
Length : 1518 bp
Strand : -
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGATTTATGCAAAGCCAGGTAGTGAAGGTTCGGTCGTAAGCTTCAAAGAAAGATACGGTAATTTTATCAATGGCGAATG
GGTTGCACCGGTTAAAGGTGAGTACTTCACCGCAACATCTCCAGTAGACGGTAGCGACATCGCACAAATCCCACGCTCAA
CATCTGAAGACATTGAGCTTGCGTTAGATGCAGCTCACGCTGCGAAAAAGGGTTGGGCAGATAAGTCAGTAGCTGAGCGT
TCTAACATTCTTCTGAAAATAGCCGATCGCATTGAAGAAAACCTAGAGCTACTTGCCGTTGCGGAAACATGGGACAATGG
TAAAGCCGTTCGCGAAACGCTTAATGCAGACATTCCGCTGTGTGCAGACCATTTCCGTTATTACGCAGGCTGTATTCGAA
GCCAAGAAGGCACCATCGGTGAAATTGATAAAACCACGGTGGCGTATCACTTCCATGAACCTTATGGTGTAGTTGGGCAA
ATCATTCCATGGAACTTCCCGCTACTTATGGCTGCATGGAAACTTGCGCCAGCACTTGTTACCGGTAACGTAGTGGTGCT
AAAGCCAGCAGAACAAACGCCAGTATCTATCTTATTGTTCGCCGAACTAATTAATGACCTACTACCACCGGGTGTACTAA
ACATTGTTAACGGGTTCGGGGCAGAAGCTGGTCAGGCCCTTGCAACAAGCACAAGAATCGCAAAAATTGCATTTACTGGC
TCTACACCTGTTGGCGGACACATCCTTCGCTGTGCTGCTGAAAACCTTATTCCATCTACCGTTGAGCTTGGCGGCAAGTC
GCCAAACTTATTCTTCCCAGACATCATGAATCACGAGCCTGAATTTATTGATAAGTGTGCGGAAGGTTTAGTGCTTGGAT
ACTTCAACCAAGGTGAAATATGTACGTGTCCTTCTCGAGCGATTATTCACGAAGACATCTATGATGCATTCATGGAAAAA
GTGTTGGAAAAAATTCAGAAGATCAAACGTGGCAACCCACTAGACACAGACACCATGGTAGGTGCTCAGGCATCTAACGA
GCAGTTCGAAAAGATCCTTAAATACATCGATATCGGTAAGTCAGAAGGAGCTCAGGTTGTCATTGGTGGTGAGAAAGAAC
AGCTACCTGGCTTTGATGGAGGCTACTACATTCAGCCTACTATTTTGAAGGGTGAAAACCACATGCGTGTGTTCCAAGAA
GAGATTTTTGGTCCGGTAATCGCAGTCCAAACCTTCAAAACCGAAGAAGAGGCCATTGAGATTGCCAATAATACAAGCTT
CGGACTTGGCGCTGGTGTATGGAGCCGCGATACGAATGTAGCATTCCGCGTAGGTCGAGCGATTGAAGCAGGTCGCGTAT
GGACGAACTGTTATCACTTGTATCCAGCTCACGCTGCGTTTGGCGGCTACAAGAAATCGGGCATTGGCCGCGAAACCCAC
AAGATGATGCTAGATCACTACCAGCAGACAAAAAATCTATTGGTAAGCTACGACATCAACCCACTTGGTTTCTTCTAA

Protein sequence :
MIYAKPGSEGSVVSFKERYGNFINGEWVAPVKGEYFTATSPVDGSDIAQIPRSTSEDIELALDAAHAAKKGWADKSVAER
SNILLKIADRIEENLELLAVAETWDNGKAVRETLNADIPLCADHFRYYAGCIRSQEGTIGEIDKTTVAYHFHEPYGVVGQ
IIPWNFPLLMAAWKLAPALVTGNVVVLKPAEQTPVSILLFAELINDLLPPGVLNIVNGFGAEAGQALATSTRIAKIAFTG
STPVGGHILRCAAENLIPSTVELGGKSPNLFFPDIMNHEPEFIDKCAEGLVLGYFNQGEICTCPSRAIIHEDIYDAFMEK
VLEKIQKIKRGNPLDTDTMVGAQASNEQFEKILKYIDIGKSEGAQVVIGGEKEQLPGFDGGYYIQPTILKGENHMRVFQE
EIFGPVIAVQTFKTEEEAIEIANNTSFGLGAGVWSRDTNVAFRVGRAIEAGRVWTNCYHLYPAHAAFGGYKKSGIGRETH
KMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 6e-173 65
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-163 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 6e-173 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 6e-173 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-172 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
amad1_16510 YP_006978140.1 aldehyde dehydrogenase family protein VFG0082 Protein 5e-164 65