Gene Information

Name : amad1_14210 (amad1_14210)
Accession : YP_006977693.1
Strain : Alteromonas macleodii AltDE1
Genome accession: NC_019393
Putative virulence/resistance : Unknown
Product : transposase-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3198552 - 3198887 bp
Length : 336 bp
Strand : +
Note : COG3436 Transposase and inactivated derivatives

DNA sequence :
ATGTTACCCTTATCCAATGGGCGTATTTGGTTGTACACCGGCAATACCGATATGCGCAAACAGTTTGATGGGCTGGCGGC
GCTGGTACAGCGCAAGTTGGGGATGCAAGCGCATTGTGGTGACTGGTTTGTGTTTATCAATAAGCGCCGTACTCAGCTGA
AGGTGTTGTATTACTACCAGGGCGGTTATTGTTTGTGGAGCAAACGGTTAGAAAAAGGCACCTTCGCTAACGTGTCTGAC
GGCAACACCAAAACACCACTCAACAGTGCCCAGTTACAGTGTTTGATTGATGGGATTTACTGGCAAAAAGGTAAACAAAA
CAGGCGATTTAATTAA

Protein sequence :
MLPLSNGRIWLYTGNTDMRKQFDGLAALVQRKLGMQAHCGDWFVFINKRRTQLKVLYYYQGGYCLWSKRLEKGTFANVSD
GNTKTPLNSAQLQCLIDGIYWQKGKQNRRFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 1e-13 44
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 1e-14 44
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-15 44
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 5e-15 44
unnamed AAC31493.1 L0014 Not tested LEE Protein 9e-15 44
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 9e-15 44
unnamed AAL99258.1 unknown Not tested LEE Protein 9e-15 44
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-14 44
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 9e-15 44
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 1e-14 44
unnamed AAL08461.1 unknown Not tested SRL Protein 5e-15 44
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 1e-14 44
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 3e-16 43
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 3e-16 43
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 5e-14 43
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 5e-14 43
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 8e-16 42
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 9e-14 41
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 9e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
amad1_14210 YP_006977693.1 transposase-like protein VFG1052 Protein 2e-15 44
amad1_14210 YP_006977693.1 transposase-like protein VFG1709 Protein 4e-15 44
amad1_14210 YP_006977693.1 transposase-like protein VFG1698 Protein 1e-15 44
amad1_14210 YP_006977693.1 transposase-like protein VFG0792 Protein 4e-15 44
amad1_14210 YP_006977693.1 transposase-like protein VFG1665 Protein 3e-16 42