Gene Information

Name : amad1_13975 (amad1_13975)
Accession : YP_006977648.1
Strain : Alteromonas macleodii AltDE1
Genome accession: NC_019393
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3141109 - 3142125 bp
Length : 1017 bp
Strand : -
Note : COG0451 Nucleoside-diphosphate-sugar epimerases

DNA sequence :
ATGAAAATACTCGTTACCGGCGCGGCCGGCTTTATTGGTGCAGCTGTATCGCAATACCTTATCAATCGTGGTGACCAAGT
TGTCGGGATTGACAACATAAACGATTATTACGATGTGAATTTAAAGCACGCTCGTTTAGACGAGATCAAATCATCATCTG
CAGCTGACCTGTTCTCATTTACAGAAATGGGCGTTGAAGAGCGCGAGAAAATGGCTGCACTCTTTGAAGAACATAAGTTC
GACAGAGTAGTACATTTAGCCGCGCAAGCTGGCGTACGCTATTCCCTCGAAAACCCGAACGCTTATGTCGATTCCAATAT
CGTCGGTTTCGTAAATATTTTAGAAGGGTGTCGCCATAATAAAGTCGAGCACTTGGTGTATGCGTCATCTAGCTCAGTGT
ATGGCGCGAATGAAACCATGCCGTTTTCAGAGCAGCATAATGTAGATCATCAGGTAAGCTTGTACGCCGCCTCTAAAAAA
GCCAATGAACTGATGGCGCACACTTACAGCCACTTGTATAACTTACCTACAACTGGGCTGCGCTTTTTCACCGTGTACGG
CCCTTGGGGGCGCCCAGATATGGCGCTTTTCAAGTTCACTAAAGCCATTTTGGAAGGCAAAACAATACAGGTTTACAACT
ACGGCAATCACCGTCGCGACTTCACCTATATCGATGATATCGTTCAAGGCGTGATTCGCTCGCTTGATAATGTGGCTAAA
CCTAATGAAAACTGGGATGGCAGCAATCCTGACCCAAGCACGAGTAAGGCGCCATATAAGGTGTATAACATTGGTGCACA
AACGCCAGTACATTTGTTAAAGTTCATTGAAACGCTGGAGAGTGCTTTAGGGATTGAAGCCAAAAAAGAGCTGCTTCCAA
TGCAGCCAGGCGATGTGCCAGATACCTATGCTGACGTATCTTCTTTAGTTGCTGATACCGGCTATCAGCCTTCTACTGAT
GTCGAAACCGGCGTAAAAGCGTTTGTCGATTGGTACCGCAACTTCTATAAAGTGTAA

Protein sequence :
MKILVTGAAGFIGAAVSQYLINRGDQVVGIDNINDYYDVNLKHARLDEIKSSSAADLFSFTEMGVEEREKMAALFEEHKF
DRVVHLAAQAGVRYSLENPNAYVDSNIVGFVNILEGCRHNKVEHLVYASSSSVYGANETMPFSEQHNVDHQVSLYAASKK
ANELMAHTYSHLYNLPTTGLRFFTVYGPWGRPDMALFKFTKAILEGKTIQVYNYGNHRRDFTYIDDIVQGVIRSLDNVAK
PNENWDGSNPDPSTSKAPYKVYNIGAQTPVHLLKFIETLESALGIEAKKELLPMQPGDVPDTYADVSSLVADTGYQPSTD
VETGVKAFVDWYRNFYKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1I AAA64648.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 7e-101 59