Gene Information

Name : smpB (amad1_09525)
Accession : YP_006976767.1
Strain : Alteromonas macleodii AltDE1
Genome accession: NC_019393
Putative virulence/resistance : Unknown
Product : ssrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2128897 - 2129376 bp
Length : 480 bp
Strand : -
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGAAAAAGAACAAAGCCAACAAAAACACCTCTGGAAATATCGCGCAAAATAAAAAGGCGCGTCACGACTATTTTCTAGA
AGACAAGTTCGAAGCAGGTCTGGAGCTTCAGGGGTGGGAAATTAAAAGTATTCGCGCAGGTAAAGTTAATATCACTGACG
CGTACATTATTATTCAAAACGCCGAAGCGTATTTAGTGGGCTGTAGAATTAGTCCGTTGAATCAGGCCTCTACCCACGTG
GTTGCTGCACCAGAGCGCGCCCGCAAACTGCTGCTAAAGAAACGTGAAATAGATCGCTTAATGGGTGCTCGAGACCGCCA
GGGTTACTCTATTGTCGCTACTTCCATGTATTGGAAGAAATGTTGGGTGAAGCTAGAAATTCACTTAGCTAAAGGTAAGC
ACGCCCACGATAAGCGCGACACCTTAAAAGACAAAGACTGGCAGCGCCAGAAAGAACGGATGATGAAACACAGCGTTTAA

Protein sequence :
MKKNKANKNTSGNIAQNKKARHDYFLEDKFEAGLELQGWEIKSIRAGKVNITDAYIIIQNAEAYLVGCRISPLNQASTHV
VAAPERARKLLLKKREIDRLMGARDRQGYSIVATSMYWKKCWVKLEIHLAKGKHAHDKRDTLKDKDWQRQKERMMKHSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 3e-45 57
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 5e-22 48