Gene Information

Name : amad1_00665 (amad1_00665)
Accession : YP_006975020.1
Strain : Alteromonas macleodii AltDE1
Genome accession: NC_019393
Putative virulence/resistance : Unknown
Product : phosphomethylpyrimidine synthase ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 149831 - 151759 bp
Length : 1929 bp
Strand : -
Note : COG0422 Thiamine biosynthesis protein ThiC

DNA sequence :
ATGTCGAACAGACGCGAACAGCGCCAACAAGCGCAACAATTCATTAATGAATTAGCGGGCGAAGCCTACCCCAACTCAAC
ACGCCATTACGAAAGTGGAAGTAGAGACGATATCCGTGTGGCCATGCGCCTTATTCACCAGCACGCCAGCTTGGTAGGCG
GCACAGAAGATAACCCTATCTTAGAACCCAACCCACCCATTCCGGTTTACGACACATCAGGCCCTTACGGCGACCCAAAG
GAAAATATTGACGTACACAAAGGTTTATCGCCTTTGCGTAAAACCTGGATTGAAGAGCGCAGCGATACCCGTGAGCTTGA
TGGCGTTTCATCAAGCTTTGCCAAAGAACGTGAAAACGACATTTTTACCGAAGACTTTCGCTTTATACGCAGTCGCAAAC
CGCTAAAAGCAAAAGCAGGCAAAAACGTTACACAGCTGCATTACGCCAGACAGGGCGTTATTACCCCTGAAATGGAATAC
ATTGCCATACGCGAAAACATGGGCCGCCAAGCCATTAAAGACCCCGAGCTAACTCAGCAGCACAAAGGCGAGCATTTTGG
CGCCAATTTACCCGAGACGATAACCCCTGAATTTGTGCGACAAGAAGTGGCCGCAGGGCGCGCTATTATTCCGTGTAACA
TTAATCACCCCGAACTAGAGCCAATGATTATTGGCCGTAACTTCTTAGTGAAAATTAACGCCAACATTGGTAATTCTGCA
GTAACGTCATCAATTGAAGAAGAGGTAGAAAAGCTGGTGTGGTCTACGCGCTGGGGCGCCGACACCATCATGGATTTATC
CACCGGCAGGAATATTCACGAAACCCGCGAGTGGCTGCTGCGAAATAGCCCAGTCCCCCTTGGTACCGTACCTATTTACC
AAGCGCTGGAAAAAGTGAATGGCGTAGCCGAAGACTTAACGTGGGAGATGTTTAAAGACACGCTTATCGAACAAGCCGAG
CAAGGGGTAGATTACTTCACTATTCACGCAGGCGTACTGCTTGAATATGTACACCTCACCGCAAAACGGGTAACCGGCAT
TGTATCTCGTGGCGGGTCGATTATGGCGAAGTGGTGTTTAAGTCGTCACCAGCAAAGCTTTTTGTACGAGCACTTCCACG
ATATTTGCGAAATTTGCGCGAAATACGATGTAGCGCTGTCGCTAGGAGATGGCTTGCGCCCTGGCAGCGTAGCAGACGCT
AACGACGATGCGCAGTTTTCTGAACTACGTACCCTTGGTGAGCTAACTAAAATTGCCTGGGAATACGATGTTCAGGTAAT
GATTGAAGGCCCAGGGCATGTGCCAATGCACATGATTAAAGAGAACATGGAAGAGCAGCTTAAGCACTGTCATGAAGCAC
CGTTTTATACCCTGGGGCCACTAACCACAGATATTGCACCGGGCTACGATCATTTCACATCCGGCATTGGTGCCGCCATG
ATTGGCTGGTATGGCTGCGCCATGCTTTGCTATGTAACCCCTAAAGAGCACCTTGGTTTACCTAACAAGGAAGACGTTAA
ACAAGGCTTAATTACCTACAAAATTGCTGCTCACGCGGCTGATTTAGCTAAAGGCCACCCGGGCGCGCAAATTCGCGACA
ACGCCATGTCGAAAGCGCGCTTTGAGTTTAGATGGGAAGATCAGTTCAATTTAGCGTTAGACCCACATACCGCGCGTGCG
TATCACGATGAAACCCTTCCGCAAGCCTCTGGCAAAGTCGCACACTTTTGCTCTATGTGCGGGCCTAAATTCTGCAGCAT
GAAAATATCTCAGGAAGTACGGGATGTCGCTAAGCAGGCGGAAAACCAAGCTCATGCCCAAGCCCCAGAAAAAGAAAAGG
AAAAAGGCATGAAGGACATGGCGAACGCATTTAATAAATCGGGCGCCGAGCTTTATCATACCGCCGACAGTAAGGTTGAA
TTGCCATGA

Protein sequence :
MSNRREQRQQAQQFINELAGEAYPNSTRHYESGSRDDIRVAMRLIHQHASLVGGTEDNPILEPNPPIPVYDTSGPYGDPK
ENIDVHKGLSPLRKTWIEERSDTRELDGVSSSFAKERENDIFTEDFRFIRSRKPLKAKAGKNVTQLHYARQGVITPEMEY
IAIRENMGRQAIKDPELTQQHKGEHFGANLPETITPEFVRQEVAAGRAIIPCNINHPELEPMIIGRNFLVKINANIGNSA
VTSSIEEEVEKLVWSTRWGADTIMDLSTGRNIHETREWLLRNSPVPLGTVPIYQALEKVNGVAEDLTWEMFKDTLIEQAE
QGVDYFTIHAGVLLEYVHLTAKRVTGIVSRGGSIMAKWCLSRHQQSFLYEHFHDICEICAKYDVALSLGDGLRPGSVADA
NDDAQFSELRTLGELTKIAWEYDVQVMIEGPGHVPMHMIKENMEEQLKHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAM
IGWYGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPHTARA
YHDETLPQASGKVAHFCSMCGPKFCSMKISQEVRDVAKQAENQAHAQAPEKEKEKGMKDMANAFNKSGAELYHTADSKVE
LP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 71
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 71
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 68