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Name : lysS (amad1_06330) Accession : YP_006976134.1 Strain : Alteromonas macleodii AltDE1 Genome accession: NC_019393 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1394295 - 1395863 bp Length : 1569 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGACTGACCAACAAACAGACGATAACAAATTGATTGCAGAGCGCCGTGCCAAATTGAGCGCTATTCGCGAGCAGTGCCG TGCCAACGGTTTCCCAAACAGCTTCCGTCGTGAAAACTATGCGGATGAGCTGCAAGCTAAGTTCGGTGAATTCGACAAAG AAACCTTGCAAGAGCAGGGCAACAAGGTAAGCATTGCTGGCCGTATTATGGCAAAGCGTGGTCCTTTCATGTTGCTTCAA GACATGACAGGTCGCATTCAAGCTTACGCAGACAAAGACACGCAAAAAGCGCTTAAAGCTAAATACGGTGCACTGGATAT TGGTGACATCATTGGCGTAGCGGGCGACCTGCATAAGTCAGGTAAAGGCGACCTTTACGTGAATATGGAGCAATACGAGT TGCTAACCAAAGCACTTCGTCCGTTGCCAGAAAAATTCCACGGTTTGAGCGACCAGGAAACTAAGTATCGCCAGCGCTAT GTTGACTTGATCACAAGCGAACAAACCCGCAAAACCTTTATGATCCGCAGTAAAATTGTGAATGGTATTCGCAATTACCT GACCGAGCGTGACTACCTAGAAGTAGAAACGCCAATGCTACAGGTTATTCCAGGTGGCGCGACGGCGAAGCCGTTTGTCA CTCACCACAATGCGCTAGATATCGACATGTATCTGCGTATTGCGCCAGAGCTTTACCTTAAGCGTTTGGTTGTTGGTGGC TTTGAGCGTGTGTTCGAAATTAACCGAAACTTCCGTAACGAAGGCTTATCTACCCGTCATAACCCTGAGTTTACTATGCT TGAATTCTACCAAGCGTATGCAGACTACAACGACCTGATGAACCTTACCGAAGATATGCTGCGCACGTTAGCGGAAGACA TTCTTGGTACAAGCATTATCAAGAACACAACGAAAGACGCTGAAGGTAACGTAACGTCTGAAGTAGAGTATGACTTTGGT AAGCCGTTCGACCGTTTGAGCATGGGCGAGGCGATTCTTAAATACTGGCCTGAAGCTGATGAAGCCGCTATTCGCGACCC AGAAGCGAACCTAGATTCGCTTAAAGCGATGGCAAAGCAGCTTCATATCAAAGAGCCTGAAGTTGACGGTATTTGGGGCG CGGGTAAATACCTGTGCGAAATCTTCGAAGCAACAGCTGAAGAGAAGCTTGAACAACCTACGTTTATCACTGAATACCCT TGGGAAGTATCGCCGCTAGCACGTCGTAATGACAACAACCCGTTCATTACCGACCGTTTCGAGTTCTTCGTAGGCGGACG TGAATTAGCCAACGGCTTTAGCGAGCTTAACGACCCAGAAGACCAAGCTGAACGTTTTGCAAAGCAAGTTGAAGAAAAAG ACGCGGGCGATGATGAAGCCATGCACTTTGACGATGACTATATTCGTGCACTTGAGTACGGCTTACCGCCAACAGCGGGT GAGGGTATTGGTATCGACCGCCTAGCTATGCTATTTACCGATAGCTCAACTATCAAAGACGTTATCTTGTTCCCACATAT GAAGCCTCAAGCGCCGAAAGACGCGCAAGAAGCCGGTGAGCAAGCGTAA Protein sequence : MTDQQTDDNKLIAERRAKLSAIREQCRANGFPNSFRRENYADELQAKFGEFDKETLQEQGNKVSIAGRIMAKRGPFMLLQ DMTGRIQAYADKDTQKALKAKYGALDIGDIIGVAGDLHKSGKGDLYVNMEQYELLTKALRPLPEKFHGLSDQETKYRQRY VDLITSEQTRKTFMIRSKIVNGIRNYLTERDYLEVETPMLQVIPGGATAKPFVTHHNALDIDMYLRIAPELYLKRLVVGG FERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYADYNDLMNLTEDMLRTLAEDILGTSIIKNTTKDAEGNVTSEVEYDFG KPFDRLSMGEAILKYWPEADEAAIRDPEANLDSLKAMAKQLHIKEPEVDGIWGAGKYLCEIFEATAEEKLEQPTFITEYP WEVSPLARRNDNNPFITDRFEFFVGGRELANGFSELNDPEDQAERFAKQVEEKDAGDDEAMHFDDDYIRALEYGLPPTAG EGIGIDRLAMLFTDSSTIKDVILFPHMKPQAPKDAQEAGEQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-131 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006976134.1 | lysyl-tRNA ligase | VFG1668 | Protein | 2e-131 | 54 |
