Gene Information

Name : amad1_05805 (amad1_05805)
Accession : YP_006976034.1
Strain : Alteromonas macleodii AltDE1
Genome accession: NC_019393
Putative virulence/resistance : Unknown
Product : prophage repressor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1284251 - 1284700 bp
Length : 450 bp
Strand : -
Note : COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases)

DNA sequence :
ATGAGTGTCTCGCTGATAGGCCGTAGCGGCGCACTTGCCTTCATCAAAGCAAAGCGCCTTCGTATTCCATTGTTCATGGA
ACGTGTTTCTGCTGGTTTTCCCTCACCAGCGCAGGATTATGTTGAGCAAATGCTCGACCTCAACGAGCTGTGCATCAAGC
GACCGGCTGCAACGTTCTTTGTGCGTGTTGAAGGTGATTCAATGATTGATGCCGGGATTCACCCAGATGATATTTTGGTG
GTTGATCGCTCTGTCCAAGCAGAACACGGTGACATTGTCATAGCGGGAATCCATGGAGAACTCACGGTAAAGGAGCTTCA
ACTAAGGCCGTGCGTCATGCTGATCCCAAGAAACCAGGCGTATGAGCCCATTCATATTCCTGAAGGAACAGAGTTGGAGA
TATTTGGTGTGGTCACCAATGTGGTGCGAAACATGCGCCGTAAGTCGTGA

Protein sequence :
MSVSLIGRSGALAFIKAKRLRIPLFMERVSAGFPSPAQDYVEQMLDLNELCIKRPAATFFVRVEGDSMIDAGIHPDDILV
VDRSVQAEHGDIVIAGIHGELTVKELQLRPCVMLIPRNQAYEPIHIPEGTELEIFGVVTNVVRNMRRKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13390.1 hypothetical protein Not tested PAGI-5 Protein 3e-20 48
rulA CAI36138.1 SOS-response transcriptional repressor Not tested PPHGI-1 Protein 2e-17 41