Gene Information

Name : BN356_0371 (BN356_0371)
Accession : YP_006973964.1
Strain : Chlamydia psittaci 01DC12
Genome accession: NC_019391
Putative virulence/resistance : Virulence
Product : putative type III secretion or flagellar-type ATP synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 44125 - 45453 bp
Length : 1329 bp
Strand : +
Note : -

DNA sequence :
ATGGACGAGTTGACGACAGATTTCGATACCCTCATGTCGCAATTGAACGACGTGCACTTGACTACCGTTGTCGGTCGTAT
AACTGAAGTCGTCGGTATGTTAATTAAAGCAGTCGTTCCCAATGTACGCGTTGGGGAGGTATGCTTAGTTAAACGTTATG
GTATGGAGCCGCTTGTTACTGAAGTCGTCGGCTTCACACAAAATTTCGCTTTTTTATCGCCGTTAGGAGAACTTACTGGA
GTCAGCCCTTCTTCAGAGGTTATTCCCACAGGTATGCCTTTGTATATTCGTGCAGGTAATGGTCTTTTAGGTCGTGTATT
AAATGGTCTGGGAGAACCTATCGACTCCGAAATCAAAGGTCCTTTAGTTGATGTTAACGAAACCTATCCTGTTTTTCGCG
CCCCTCCAGATCCATTGCATAGAGAAAAATTAAGGACAATTTTATCCACAGGTGTGCGGTGTATCGACGGTATGCTCACA
GTCGCCAGAGGTCAGCGTATAGGAATTTTTGCTGGTGCTGGGGTTGGTAAATCGTCGCTCCTAGGAATGATCGCTAGAAA
CGCTGAAGAAGCAGATGTCAATGTGATTGCTCTCATAGGAGAGCGGGGCCGAGAGGTTCGTGAGTTTATCGAGGGAGATC
TTGGAGAAGAAGGAATGAAACGATCGGTGATCGTCGTCTCTACTTCAGATCAATCATCACAGTTGCGGTTAAATGCTGCT
TATGTAGGGACTGCTATAGCAGAGTATTTCCGTGATCAGGGTAAAACTGTAGTTTTGATGATGGATTCTGTAACCCGATT
TGCCCGAGCTCTCAGAGAAGTAGGTTTGGCTGCCGGAGAACCTCCAGCTCGAGGAGGATACACGCCTTCTGTATTTTCCA
CTTTACCTAGGTTATTAGAACGTTCCGGAGCTTCTGATAAAGGAACAATTACAGCATTTTATACTGTACTTGTTGCCGGG
GATGATATGAATGAACCGGTCGCTGATGAAGTTAAATCGATTCTTGATGGTCATGTTGTCTTGTCTAATGCTTTAGCTCA
GGCATATCACTATCCCGCTATTGATGTTTTAGCATCAATAAGCCGATTGCTAACAGCTATTGTTCCTGAGGAACAAAGAC
GCATCATAGGAAAAGCCCGAGAGGTACTGGCAAAGTATAAGGCAAACGAAATGCTTATACGTATTGGAGAATACCGCCGA
GGGTCCGATCGTGAAGTAGATTTTGCTATAGATCACATCGATAAATTGAACAGATTCTTAAAGCAAGATATTCATGAAAA
AACAAATTATGAGGAAGCCTCGCAACAACTTCGAGCCATTTTCCGATAA

Protein sequence :
MDELTTDFDTLMSQLNDVHLTTVVGRITEVVGMLIKAVVPNVRVGEVCLVKRYGMEPLVTEVVGFTQNFAFLSPLGELTG
VSPSSEVIPTGMPLYIRAGNGLLGRVLNGLGEPIDSEIKGPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLT
VARGQRIGIFAGAGVGKSSLLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNAA
YVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARGGYTPSVFSTLPRLLERSGASDKGTITAFYTVLVAG
DDMNEPVADEVKSILDGHVVLSNALAQAYHYPAIDVLASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRR
GSDREVDFAIDHIDKLNRFLKQDIHEKTNYEEASQQLRAIFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 3e-104 56
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 7e-78 55
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 7e-78 55
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-93 53
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-93 52
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-93 52
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 4e-94 52
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-93 52
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-94 52
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-94 52
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 6e-93 52
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 4e-94 52
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 1e-80 51
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-79 50
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-79 50
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-79 50
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-79 50
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 3e-79 50
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 2e-74 47
unnamed AAL06369.1 EscN Virulence LEE Protein 3e-79 47
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 8e-82 47
escN AAC31513.1 L0034 Virulence LEE Protein 1e-81 47
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-81 47
escN CAI43874.1 EscN protein Virulence LEE Protein 6e-82 47
escN CAC81862.1 EscN protein Virulence LEE II Protein 5e-82 47
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-81 47
escN AAC38383.1 EscN Virulence LEE Protein 2e-81 47
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-81 47
escN AAK26715.1 EscN Virulence LEE Protein 1e-81 47
escN YP_003236088.1 translocator EscN Virulence LEE Protein 1e-81 47
escN YP_003223475.1 translocator EscN Virulence LEE Protein 9e-82 47
escN AAL57542.1 EscN Virulence LEE Protein 1e-81 47
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 5e-77 47
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 5e-77 47
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-82 47
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 7e-72 46
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-76 46
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 7e-67 45
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-71 45
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-71 45
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-85 44
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-79 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 1e-79 44
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-79 44
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 1e-67 43
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-63 43
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 2e-63 43
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-63 43
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 2e-63 43
invC AAS66861.1 InvC Not tested SSR-2 Protein 1e-66 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN356_0371 YP_006973964.1 putative type III secretion or flagellar-type ATP synthase VFG2144 Protein 0.0 92
BN356_0371 YP_006973964.1 putative type III secretion or flagellar-type ATP synthase VFG0192 Protein 3e-109 57
BN356_0371 YP_006973964.1 putative type III secretion or flagellar-type ATP synthase VFG0390 Protein 1e-103 56
BN356_0371 YP_006973964.1 putative type III secretion or flagellar-type ATP synthase VFG0048 Protein 1e-104 55
BN356_0371 YP_006973964.1 putative type III secretion or flagellar-type ATP synthase VFG0515 Protein 8e-80 50
BN356_0371 YP_006973964.1 putative type III secretion or flagellar-type ATP synthase VFG0730 Protein 9e-82 47
BN356_0371 YP_006973964.1 putative type III secretion or flagellar-type ATP synthase VFG0812 Protein 6e-82 47
BN356_0371 YP_006973964.1 putative type III secretion or flagellar-type ATP synthase VFG2459 Protein 2e-68 45
BN356_0371 YP_006973964.1 putative type III secretion or flagellar-type ATP synthase VFG2499 Protein 3e-76 45
BN356_0371 YP_006973964.1 putative type III secretion or flagellar-type ATP synthase VFG2331 Protein 1e-76 44
BN356_0371 YP_006973964.1 putative type III secretion or flagellar-type ATP synthase VFG1254 Protein 6e-78 44
BN356_0371 YP_006973964.1 putative type III secretion or flagellar-type ATP synthase VFG0555 Protein 9e-64 43
BN356_0371 YP_006973964.1 putative type III secretion or flagellar-type ATP synthase VFG1778 Protein 6e-68 43
BN356_0371 YP_006973964.1 putative type III secretion or flagellar-type ATP synthase VFG1008 Protein 2e-61 41