Gene Information

Name : Theos_0102 (Theos_0102)
Accession : YP_006971282.1
Strain : Thermus oshimai JL-2
Genome accession: NC_019386
Putative virulence/resistance : Virulence
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 90642 - 91328 bp
Length : 687 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGCTCCGCGCGGAAGGCCTCACCAAGCGTTACCGGCAAGGGGAGAAGGAGGTGGTGGCCCTCCAGGGCTTCACCTACGC
CTTCCCTCCCGGGGCCACGGCCATCGTGGGGCCCTCGGGCTCGGGGAAGACCACCCTCTTAAACCTCCTCGCGGGGCTTG
ACCTGCCCACGGAGGGCGGGGTGTACCTGGGGGAGACCGCCCTCCACCGCCTTTCCGAGGACGAGCGGGCCCTGCTCCGC
CTCCGGCACATGGGCTTTGTCTTCCAGCAGTGGAACCTCATCCCCACCCTCACCGCCTGGGAGAACGTGGCCTTTCCCCT
CCTCCTTGCGGGCTGGCCCCTCGCGAAGCGGCGGGCCAGGGCCCTGGAGCTTTTGGAGGCGGTGGGCCTCTTGGGGCGGG
CGGACCACCCCCCCTCGAGGCTCTCCGGGGGGGAGCAGCAGCGGGTGGCCCTGGCCCGGGCCCTGGCCCTGGAACCCGAG
GTCCTCTTCGCCGACGAGCCCACGGGCAACCTGGACGCGGAGTCCCGGGAGGAGGTGGCCCGCCTCCTCTTCCAGGCGGG
CCGGGATCGGACCCTGGTCCTCGTCACCCATGACCTCGAGCTCGCCGCCCGCGCGGAGAGGCGGCTCTACCTAAAGGGCG
GGCGGCTCCTGAAGGTGGAGGAGGCTCAGGGGAGCCGCACCAAGTAG

Protein sequence : 
MLRAEGLTKRYRQGEKEVVALQGFTYAFPPGATAIVGPSGSGKTTLLNLLAGLDLPTEGGVYLGETALHRLSEDERALLR
LRHMGFVFQQWNLIPTLTAWENVAFPLLLAGWPLAKRRARALELLEAVGLLGRADHPPSRLSGGEQQRVALARALALEPE
VLFADEPTGNLDAESREEVARLLFQAGRDRTLVLVTHDLELAARAERRLYLKGGRLLKVEEAQGSRTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-15 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-15 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-15 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-15 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theos_0102 YP_006971282.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 2e-18 48
Theos_0102 YP_006971282.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 5e-19 44
Theos_0102 YP_006971282.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 2e-19 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theos_0102 YP_006971282.1 ABC-type antimicrobial peptide transport system, ATPase component VFG2059 Protein 4e-04 44