|
Name : prpR (BN112_0928) Accession : YP_006967008.1 Strain : Bordetella bronchiseptica 253 Genome accession: NC_019382 Putative virulence/resistance : Unknown Product : propionate catabolism operon regulatory protein Function : - COG functional category : - COG ID : - EC number : - Position : 988949 - 990877 bp Length : 1929 bp Strand : + Note : - DNA sequence : ATGCCCGCGCTTTCCGCCGCGCAGCCCCTGCCGCGCCTGTGCTTCGTCAGCTACCGCCAGATCCGCGAATTCGCCGCCCC GGTGATCGCCGAATACCGCAACCGGGCCGCCATCGACGTAGTGGACGGCACCTTCGCCGATGCCCTGGCGGTCGCGCGCG ACCGCATCGAGCGCAATGCGGTCGACGCCTTCATCAGCGCGGGCGCCAACGCCAGCATCCTGCGCGCCAACCTGCAGGCC CCGGTGGCCACCATCCAGCTGGGCGGCTTCGATCTGCTGCAGGCCCTCATCCGGGCGCGGCGCATCGCCAGCCGGGTCGG GGTGGTCATGTACGGCCAGACGCTGCCCGAGCTCGATGCCGTCAAGGAGCTGCTCAATATCGAGATCACCCAGTACGCCT ACCAGACGCCGTATCACGCCCGCCAGGGCTTCGAACAGCTGCGGCGCGACGGCTTCCAGGTGATCGTGGGCTCCAGCCTG GTGGTCGAGCTGGCCGAGGAAGCGGGCCTGCGCGGCATCCTCGCCTATTCGCTGGCGAGCATACGCCAGGGGTTCGAGGA CGCCATCGAGCTGGCGCGCGTGGCGCGCCTGGAGGCCGGCCGCTACGAGCAGCTCAATGGCGTGCTGCACAACCTGCAGG AGGCGGTGCTGGCGGTCGACCGCGACCACCGCATCATCGCCGTCAATCCGCCCATGCGCGAGCTGCTGGGCATGCCCAAC CGCACGCTGCTGGGGCAGCGCCTGGATGCCGTCGAACCCGAGCTGTCGCTGCAGCCCACGCTGGACTCGGGCCGGGCCGA GCGCGCCGCCGTGCAGCGCTACGCCAGGCGCGACTGGATCGCCAATCGCACGCCCATTCTCGAGTACGGCAAGCTGGTCG GCGCCGCCCTGACCCTGTATGACGCGCACCGCATCCAGGAGGCCGACAGCAGCTTGCGCATGCAGCAACGCCGTCGCCAG AGCGCGGCCCGCCACCGCTTCGACACCCTGCTCGGGCAAAGCCCCGCGTTCATGCGCGCCGTCGACACCGCGCGCCGCTA CGCCGGCACCGACCTGCGCGTGCTGATCCAGGGCGAAAGCGGCGTCGGCAAGGAGCTGTTCGCCCAGTCGATCCACAACG CCAGCGCGCGCGCCCACCGCCCCTTCGTCGCCATCAATTGCGCGTCGCTGCCCGAAACCCTGCTCGAGAGCGAACTGTTC GGCTACGAGGACGGCGCCTTCACCGGGTCGCGCCGCGACGGCAAGCGCGGCCTGATCGAGGCCGCGCATACGGGCACGCT GTTTCTCGATGAGATCGGCGACATGCCGCTGTCGCTGCAGACGCGCCTGCTGCGCGTGCTGCAGGAAGGCGAAATCACGC GCCTGGGCGCCACCACGCCGGTGCCGGTGGACGTGCGCGTGCTGGCCGCCACCCATCAGCCGCTGCAGGAGCTGGTGGCC CAGCGACGCTTCCGCCAGGATCTGTACTACCGCATCAACGCCCTGCGGCTGCCGCTGCCGCCCTTGCGCGAGCGCGGCGC CGACATCGCCTTGCTGGCGACCCGCCTGGTTGCGCGCTGCCTGGACCGGCTGGGCTCGCCCCTGGACGCCGAGGCCGCGC TCGCCGCCCTGCTGCCGCGGCTGGCCGCCTATCCCTGGCCGGGCAACGTGCGCGAGCTGGAGAACCTGTGCGAGCGGATC GCGGTGTTCCTGCTGCAGTTCGACGACGCCGAGGCGATCCGCCATGACGCCTTGCGCCACGAATGCCCCGAGCTGTTCGA GCACCTCGCCGCCATGGACGCGCCGCGTCCGGAGCGCATCGCACAGGCCCTGCGCCAGGCCGATGGCAATCGCGCACAGG CCGCCGCGCAGCTGGGCGTGAGCCGCTCGACGCTGTGGCGCTGGCTCAGGCAGATCGACGCCGCCGACGATGGCGCGCGC GCGACTTGA Protein sequence : MPALSAAQPLPRLCFVSYRQIREFAAPVIAEYRNRAAIDVVDGTFADALAVARDRIERNAVDAFISAGANASILRANLQA PVATIQLGGFDLLQALIRARRIASRVGVVMYGQTLPELDAVKELLNIEITQYAYQTPYHARQGFEQLRRDGFQVIVGSSL VVELAEEAGLRGILAYSLASIRQGFEDAIELARVARLEAGRYEQLNGVLHNLQEAVLAVDRDHRIIAVNPPMRELLGMPN RTLLGQRLDAVEPELSLQPTLDSGRAERAAVQRYARRDWIANRTPILEYGKLVGAALTLYDAHRIQEADSSLRMQQRRRQ SAARHRFDTLLGQSPAFMRAVDTARRYAGTDLRVLIQGESGVGKELFAQSIHNASARAHRPFVAINCASLPETLLESELF GYEDGAFTGSRRDGKRGLIEAAHTGTLFLDEIGDMPLSLQTRLLRVLQEGEITRLGATTPVPVDVRVLAATHQPLQELVA QRRFRQDLYYRINALRLPLPPLRERGADIALLATRLVARCLDRLGSPLDAEAALAALLPRLAAYPWPGNVRELENLCERI AVFLLQFDDAEAIRHDALRHECPELFEHLAAMDAPRPERIAQALRQADGNRAQAAAQLGVSRSTLWRWLRQIDAADDGAR AT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 2e-95 | 45 |
