Gene Information

Name : fimB (BN112_0793)
Accession : YP_006966874.1
Strain : Bordetella bronchiseptica 253
Genome accession: NC_019382
Putative virulence/resistance : Virulence
Product : chaperone protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 836881 - 837705 bp
Length : 825 bp
Strand : -
Note : -

DNA sequence : 
ATGAATACATACGCTTGTGACGGGGCGCTCGCGCAGAGCCGGCCCCAGGGATGGTTTACGCCTGCATTTACGGTAAAGCG
GCAAGGCAGCATGGCGCGCTGGCGCCGGCGGCTGGGCGTCGCGGCGCTGGGCGCCGCCATGCTGGCGAGCCTGGCGCCGG
CTGCCCGGGCCAGCCTCGTCATCACGGGTACGCGCGTGATCTACAACGCGGGCTCGCCCGAGACCACGGTGAAGATGAGC
AACGAGGGGCAGGCCCCCGCGCTGATGCAGGCATGGATCGATGACGGCAATGCCGAGGCGAAGCCGGACGAAGTCCAGGT
GCCGTTCTTCCTGACGCCTCCGCTGGCGCGGGTGGACCCGGGCAAGGGGCAGACCTTGCGCATTTTCTTCAATGGCTACC
CGGATGGCAAGACGCTGCCGTCCGACCGCGAATCGGTCTTCTGGCTGAACGTTCTCGAAGTGCCGCCCAAGGCGACGCCC
GAGGAAGGCCACGGGGTCCTGCAGCTGACCATCCGCTCGCGCCTGAAGCTGTTCTATCGGCCCAAGGGCCTGCCTGGCAA
CCCGCTGACGGCCGCCGCCGACCTGACCTTCAAGCGCAAGGCCAACGGCGTGCTGGAGGTGCACAACCCGACGCCGTACT
ACGTGAACCTGCAAAAGCTGGAGGTGGGCGAGAACGGCGCGCACGGCAGCAAGACGCCGTGGATGCTGGCGCCGCTTTCC
TCGGATGAGCTGCGGCTGAAAGGGACGGGGGCCAAGTCGGTGCAGTACTGGGCCATCGACGACTTCGGCGGCGTGACGCC
ATATCAGGCGGCCATAGCGGACTGA

Protein sequence : 
MNTYACDGALAQSRPQGWFTPAFTVKRQGSMARWRRRLGVAALGAAMLASLAPAARASLVITGTRVIYNAGSPETTVKMS
NEGQAPALMQAWIDDGNAEAKPDEVQVPFFLTPPLARVDPGKGQTLRIFFNGYPDGKTLPSDRESVFWLNVLEVPPKATP
EEGHGVLQLTIRSRLKLFYRPKGLPGNPLTAAADLTFKRKANGVLEVHNPTPYYVNLQKLEVGENGAHGSKTPWMLAPLS
SDELRLKGTGAKSVQYWAIDDFGGVTPYQAAIAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 3e-39 43
unnamed CAD33727.1 putative F17-like fimbrial chaperone Virulence PAI I 536 Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fimB YP_006966874.1 chaperone protein VFG0007 Protein 2e-97 99
fimB YP_006966874.1 chaperone protein VFG1145 Protein 2e-34 45
fimB YP_006966874.1 chaperone protein VFG1468 Protein 1e-31 41