Gene Information

Name : smpB (BN112_0443)
Accession : YP_006966528.1
Strain : Bordetella bronchiseptica 253
Genome accession: NC_019382
Putative virulence/resistance : Unknown
Product : ssrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 456983 - 457450 bp
Length : 468 bp
Strand : -
Note : -

DNA sequence :
ATGAGTATTATCGATAACCGCAAGGCCACGCACGACTATTTCATCGAGGACCGCTACGAGGCTGGCATGGTCCTGGAAGG
ATGGGAAGTGAAGGCCATCCGCGAAGGCCGCGTGCAATTGAAGGAAAGCTACGTCATCGTGCGCGATGGCGAGATCTACC
TGCTGGGCATGCACGTCAGCCCGCTGCCCACCGCGTCCACCCACGTCCGTCCCGACGCCACCCGCACCCGCAAGCTGCTG
CTCAAGGCCGAGGAAATCCGCAAGCTGATCGGCAAGGTCGAACAGCGCGGCTACACGCTGGTTCCGCTCAACCTGCATTA
CAAGAACGGCCGCATCAAGCTGGACTTCGCGCTGGGCCGCGGCAAGAAGCTGTACGACAAGCGCGACACCGCCCGCGAAA
AGGATTGGCAGCGCGAAAAGGAACGCGTCATGAAGCACGACACGCGCGTCAGCCAGCGCGATTCCTGA

Protein sequence :
MSIIDNRKATHDYFIEDRYEAGMVLEGWEVKAIREGRVQLKESYVIVRDGEIYLLGMHVSPLPTASTHVRPDATRTRKLL
LKAEEIRKLIGKVEQRGYTLVPLNLHYKNGRIKLDFALGRGKKLYDKRDTAREKDWQREKERVMKHDTRVSQRDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 7e-36 49
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 3e-26 47
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 7e-21 46