Gene Information

Name : BN112_0321 (BN112_0321)
Accession : YP_006966409.1
Strain : Bordetella bronchiseptica 253
Genome accession: NC_019382
Putative virulence/resistance : Resistance
Product : membrane transport ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 323101 - 325422 bp
Length : 2322 bp
Strand : -
Note : -

DNA sequence :
ATGCCCTCCACGACCCGCGACCTTGCCCTCGATACGCCATCCGGCCAACGCACGGACGCCCACGGCCACGACCACGCAGG
CCATGACCATGCCGGGCACGACCATGCCCACGACCATGGCATCCCGGCCTGCTGCGGCCATGAGCACGGCCAGCCGGCCG
CGCCCGCGGCCGCCCCGGCCTGGCAGCCCGGTCCGGGCCAGCAGGTCACGCGGGTGCGCATCGGGCAGATGGACTGCCCC
ACCGAGGAAACGCTGATCCGCAAGAAGCTGGCCAGCCTGCCCGAGGTGCACGAGCTCGACTTCAACCTGATGCAGCGCGT
ACTGACCGTGCTGCATGCCGACGGCGCGCTCGATCGCATCGACGCGGCGATCCGCTCGCTGGGCATGACGCCCGAGCCCC
TGGCCGGCGACGCCCCGGCGACCCCGGCCGGCGCGGCCGCGCCTTCGCGCGGCTGGCGCCTGCTGGCCGCCGGCGGGGTG
CTGGCGGCGCTGTCCGAGCTCGCCCACTTCACCGGCCAGCCGGTCTATGTCGCCGCCGCCCTGGCGCTGGCGGCCATCCT
GGCCTGCGGGCTGTCGACCTACCGCAAGGGCTGGATCGCGGTGCGCAACGGCAACCTCAACATCAATGCCCTGATGAGCA
TCGCCGTGACCGGCGCGATGCTCATCGGCCAATGGCCGGAAGCGGCCATGGTGATGTTCCTGTTCAACGTGGCCGAGCTG
ATCGAGGCCCGCGCCCTGGACCGCGCCCGCCATGCGGTGCGCGGCCTGCTGGACCTGGCGCCGCAGACCGCCACCGCGCG
CCAGCCGGACGGCTCGTGGGCCGAGGTGCCGGCGGCGCGACTGCGCCCGGGCGACCTGGTGCGGGTGCGCCCGGGCGAGC
GCATCGCCGCCGACGGCACCATCAGCGAAGGCCAGTCCGCGATCGACCAGTCGCCCATCACCGGCGAAAGCCTGCCGGTG
GAAAAAGGCCCGGACGACGACGTCTACGCCGGCACCGTCAATGCCTCCGGGTCGTTCGACTACCGCGTCACGGCGGCGGC
CGGCAATACCACGCTGGACCGCATCATCCACGCGGTCGAACAGGCCCAGGGCGCGCGCGCCCCGACCCAGCGCTTCATCG
ACCGCTTCTCGCGCATCTACACGCCGGCCGTGGTCGGGCTGGCGGTGCTGGTCGCGCTGGCGCCGCCGCTGCTGCTGGGC
CACGCCTGGCTCGACTCCGGGTACCGCGCGCTGGCGCTGCTGATCATCGCCTGCCCCTGCGCGCTGGTGATTTCCACCCC
GGTCAGCGTGGTCAGCGGCCTGACCGCCGCCGCGCGGCGCGGCATCCTGATCAAGGGCGGCGTCTACCTGGAGGAAGGAC
GCAAGCTGCGCTGGCTGGCGCTGGACAAGACCGGCACGCTGACCCAGGGCAAGCCGGTGCAGACCGACCTGGAACTGCTG
CACGACGCCAGCGCGGGCGGGCGCCCGGCGCTGCGCGCCGCGGTCAGCCTGGCGGCGCGCTCGGACCACCCCGTGTCGCG
CGCGCTGGCCCAGGCCGACCACGCCCTGGACGCGCCGCTGGACGAGGTGAACGGTTTCGCCGCCCTGCCCGGCCGCGGCG
TGCAGGGCGAGATCGGCGGCGAGCGCTTCCAGCTGGGCAACCGCCGCCTGATGCGCGAGCTGGGCGTCAGCACGCCCGAT
ATCGAGGCCCGCATCGACGCCTATGAAGCGGCCGGCAAGACCGCCATCGCCCTGGCCGACGGGCAGCGCGTCCTGCTGCT
GGCCGCGGTGGCCGACACGCTCAAGGCCAGCAGCGCCGCCGCCGTGGCCGACCTGCACCGGCTGGGCGTGCGCACCCTCA
TGCTGACCGGCGACAACACCCGCGCCGCCCAGGCGGTGGCCGCCCAGGCCGGCATCGACGAGGCGCGCGGCGACCTGCTG
CCGCAGGACAAGCTGGACGCCGTCGAGGCCAAGCTGGATCCGGCCCTGCGCGTGGGCATGGTGGGCGACGGCATCAACGA
CGCGCCGGCGCTGGCGCGCGCCGACATCGGCTTCGCCATGGGCGCGGCCGGCACCGGCACCGCCATCGAAACCGCCGACG
TGGCGCTGATGGACGACGACCTGCGCAAGATCGGCACGTTCGTGCGCCTGTCGCGCGCCACCCACCGCATCCTGACCCAG
AACATCGTCCTGGCGCTGGGCATCAAGGCGGTGTTCCTGGTGCTGGCGATGGCCGGCCAGGCCACGCTGTGGATGGCGGT
GTTCGCCGACGTCGGCGCCAGCCTGCTGGTGGTCGCCAACGGCTTGCGGCTGCTGCGCGCGGGCAGGCACCAGGCGTCCT
GA

Protein sequence :
MPSTTRDLALDTPSGQRTDAHGHDHAGHDHAGHDHAHDHGIPACCGHEHGQPAAPAAAPAWQPGPGQQVTRVRIGQMDCP
TEETLIRKKLASLPEVHELDFNLMQRVLTVLHADGALDRIDAAIRSLGMTPEPLAGDAPATPAGAAAPSRGWRLLAAGGV
LAALSELAHFTGQPVYVAAALALAAILACGLSTYRKGWIAVRNGNLNINALMSIAVTGAMLIGQWPEAAMVMFLFNVAEL
IEARALDRARHAVRGLLDLAPQTATARQPDGSWAEVPAARLRPGDLVRVRPGERIAADGTISEGQSAIDQSPITGESLPV
EKGPDDDVYAGTVNASGSFDYRVTAAAGNTTLDRIIHAVEQAQGARAPTQRFIDRFSRIYTPAVVGLAVLVALAPPLLLG
HAWLDSGYRALALLIIACPCALVISTPVSVVSGLTAAARRGILIKGGVYLEEGRKLRWLALDKTGTLTQGKPVQTDLELL
HDASAGGRPALRAAVSLAARSDHPVSRALAQADHALDAPLDEVNGFAALPGRGVQGEIGGERFQLGNRRLMRELGVSTPD
IEARIDAYEAAGKTAIALADGQRVLLLAAVADTLKASSAAAVADLHRLGVRTLMLTGDNTRAAQAVAAQAGIDEARGDLL
PQDKLDAVEAKLDPALRVGMVGDGINDAPALARADIGFAMGAAGTGTAIETADVALMDDDLRKIGTFVRLSRATHRILTQ
NIVLALGIKAVFLVLAMAGQATLWMAVFADVGASLLVVANGLRLLRAGRHQAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 1e-167 64
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 2e-93 44
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 2e-93 44
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 3e-91 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN112_0321 YP_006966409.1 membrane transport ATPase BAC0298 Protein 1e-164 64
BN112_0321 YP_006966409.1 membrane transport ATPase BAC0461 Protein 9e-71 43