|
Name : gabD (BN112_3095) Accession : YP_006969143.1 Strain : Bordetella bronchiseptica 253 Genome accession: NC_019382 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 3345923 - 3347404 bp Length : 1482 bp Strand : - Note : - DNA sequence : ATGTCCTTATCCGTCGGCAACGCCGCGCTGCTGCCTGGCCGCAACCTGATTGGATCGGAATGGCGCGAAGCGGCGCTGGG CGCGCGCTTCGCGGTTGCGGATCCCGCCACCGGCAAGGTGATCGCGCATGTGCCCGACAGCGGCGCGCGCGATGCGGGCG CGGCCGTCACGGCGGCGCACCAGGCCTTCGCGGACTGGCGCCGGACCCCCGCCAAGGTCCGCGCGCAGATCATCAAGCGC TGGAATGCCCTGTTGCACGAGAACGCCGAAGACCTGGCCCGTCTGATTTCCTCGGAGCAGGGCAAGCCGCTGGCCGAGGC TCGCGGCGAGGTGAGCTATGCGGCCAGTTATGTCGAGTGGTTCGCCGAAGAGGCCACGCGCGCCGACGGCGACCTCATCC CCAGCCCGGCGCAAGGGCGGCGCATGTTCGCGCTGCGCGAGCCGGTCGGCGTGGTGGCGGCGATCACGCCGTGGAACTTC CCGGCGGCCATGATCGCCCGCAAGATCGCCCCGGCCCTGGCGGCCGGGTGCACGGTCGTGTGCAAGCCGGCCGAGGACAC GCCGCTGACGTCGCTGGCGCTGACGGCCCTGGCGCAGCAGGCGGGGGTGCCGCCCGGCGTGCTCAACATCGTGACCGCCT CGCGGGGCCGCGCCGCCGAAGTCGCCGACGCCTGGCTGGACGACCCGCGCGTGCGCAAGATCACCTTTACCGGCTCCACC CCCGTGGGCAAGCATCTGGCCAGGCGCAGCGCCGACACCTTGAAGCGGGTCTCGCTGGAGCTGGGCGGCAATGCGCCTTT CATTGTGTTCGACGACGCCGACCTGGACGCCGCGGTCGAGGGCCTGATGGTGTCCAAGTTCCGCAATGGCGGCCAGACCT GCGTCTGTCCCAACCGCATCTTCGTGCAGGCCGGCGTGCACGACGCGTTCGTCCGCAAGCTGGCGGCGCGGGTGGAGGGG CTGGTCGTCGGGCCGGCCAGCGACCCAGCTTCGCAGATCGGGCCGATGATCAACGCGCGCGCCGTCGAGAAGATCGAGCA TCACGTCGCCGATGCCCTGGAGCGCGGCGCTCGCCTGGCAGTGGGCGGCAAGCGCATCCACTCGGCCCGTTGCGCCGGCG ACCACTATTACGCGCCGACCGTGCTGACGGGGGTGGACGAGACCATGGCGTGCTTTCGCGAGGAAACCTTCGGACCGGTC GCGCCGATCACGGTCTTCGCCAGCGAGGCCGACGTGGTGGCGGCGGCCAATGCGACCGCGTTCGGCCTGGCCGCCTACTT CTACTCGACCGACGTGCGGCGCATCTGGCGCCTGGCCGACGCGCTGGAGACCGGCATTGTCGGCGTCAACGAGGGGGCGC TGGCCGCCGAGGCGGCCCCGTTCGGGGGCGTCAAGGATTCGGGCTACGGCCGCGAAGGGTCGCGCCATGGCCTGGCCGAG TATATGCAGATCAAGTACGTCTGCCAGGGCCAGCTGGACTGA Protein sequence : MSLSVGNAALLPGRNLIGSEWREAALGARFAVADPATGKVIAHVPDSGARDAGAAVTAAHQAFADWRRTPAKVRAQIIKR WNALLHENAEDLARLISSEQGKPLAEARGEVSYAASYVEWFAEEATRADGDLIPSPAQGRRMFALREPVGVVAAITPWNF PAAMIARKIAPALAAGCTVVCKPAEDTPLTSLALTALAQQAGVPPGVLNIVTASRGRAAEVADAWLDDPRVRKITFTGST PVGKHLARRSADTLKRVSLELGGNAPFIVFDDADLDAAVEGLMVSKFRNGGQTCVCPNRIFVQAGVHDAFVRKLAARVEG LVVGPASDPASQIGPMINARAVEKIEHHVADALERGARLAVGGKRIHSARCAGDHYYAPTVLTGVDETMACFREETFGPV APITVFASEADVVAAANATAFGLAAYFYSTDVRRIWRLADALETGIVGVNEGALAAEAAPFGGVKDSGYGREGSRHGLAE YMQIKYVCQGQLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-116 | 55 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 5e-74 | 41 |
