Gene Information

Name : BN112_2565 (BN112_2565)
Accession : YP_006968619.1
Strain : Bordetella bronchiseptica 253
Genome accession: NC_019382
Putative virulence/resistance : Virulence
Product : UDP-N-acetylglucosamine C4 epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2772125 - 2773150 bp
Length : 1026 bp
Strand : -
Note : -

DNA sequence : 
ATGACGAATCGCTTTGAGACCACGTGCGCGCAGTTGCGGGCCCAACCCCGGAAATGGCTGGTGACCGGCTGCGCCGGCTT
CATCGGCTCGAACCTGCTCGAGACGCTGCTGGGGCTGGATCAGGCGGTGGTGGGGCTGGACAATTTCGCCACGGGGCACC
AGCACAACCTGGACGAGGTCCGCGCGGCGGTGACGCCCGAGCAGTGGGCGCGCTTTACCTTCATCGAAGGCGACATCCGC
GACCTGGCGACCTGCCAGCGCGCGGTGCAGGGCGTGGAGCGGGTGCTGCACCAGGCCGCGCTGGGTTCGGTGCCGCGTTC
GCTGAAGGACCCGATCACGACCAACGAGGTCAACATCGGGGGATTCCTGAACATGCTGGTGGCCGCGCGCGACGCGCAGG
TCCAGGCGTTCGTCTACGCGGCCTCGAGTTCGACCTACGGCGACCATCCCGACCTGCCGAAGGTCGAGGACCGCATCGGC
AATCCGCTCTCGCCGTACGCGGTGACCAAGTACGTCAACGAGCTGTACGCCGATGTGTTCGCGCGCTCGTACGGGTTCTC
CAGCGTGGGGCTGCGCTACTTCAATGTGTTCGGCAAGCGCCAGGATCCGGACGGCGCGTACGCGGCGGTGATTCCGAAGT
GGACGGCGGCGATGATCAAGGGCGAGGACGTCGTGATCAACGGCGACGGCCAGACCAGCCGCGACTTCTGCTTCGTGGAG
AACGCGGTGCAGGCCAACCTGCTGGCGGCGATGGCCGGTCCGCAAGGGTCGAACCAGGTCTACAACGTGGCGTACAACGC
GCGCACGACGCTGACCGAGCTGTTCGAGCACCTGCGGCGCACGCTGGCCGGGCAGGGGGTGTCGTACGAGAAGGCGCCGG
TGTACGCGGACTTCCGCGCCGGCGACGTGCGCCACTCGCAGGCCGACATCGGCAAGGCCGGCAAGCTGCTGGGCTACGAG
CCGGCCTACGACATCCTGCGCGGGCTGGAAGCCGCCATGCCCTGGTACACGCAATTCCTGCGTTGA

Protein sequence : 
MTNRFETTCAQLRAQPRKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRAAVTPEQWARFTFIEGDIR
DLATCQRAVQGVERVLHQAALGSVPRSLKDPITTNEVNIGGFLNMLVAARDAQVQAFVYAASSSTYGDHPDLPKVEDRIG
NPLSPYAVTKYVNELYADVFARSYGFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVE
NAVQANLLAAMAGPQGSNQVYNVAYNARTTLTELFEHLRRTLAGQGVSYEKAPVYADFRAGDVRHSQADIGKAGKLLGYE
PAYDILRGLEAAMPWYTQFLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 4e-104 63
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 4e-104 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN112_2565 YP_006968619.1 UDP-N-acetylglucosamine C4 epimerase VFG0430 Protein 2e-104 63