Gene Information

Name : ttrA (BN112_2216)
Accession : YP_006968278.1
Strain : Bordetella bronchiseptica 253
Genome accession: NC_019382
Putative virulence/resistance : Virulence
Product : tetrathionate reductase subunit A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2384110 - 2387271 bp
Length : 3162 bp
Strand : +
Note : -

DNA sequence :
ATGCCCAAGCAGCACCCCACCCCCGACCCCAACGCGCCGGCCGACGCGCGCCGCCGCAAGCTGATCGCCCGCGGCGGCGC
CGTGGCCGGCGGCATGGCCGCCTTCGCCGCCGGCTACGGCGAAACCGTGGCCCGCGCCGTCAAGGGCCTGGCCCAGGGCA
GCGCCGGCGCGCCCACCGCCGACGCCTTGCGCGGCAATTCGCTCACCCCGGAATTCCGCATCGATCCGGTCACCGGCGCG
CTGTCGGCCCAGCCGGGCCAGACCGTCAGCCCCTCCAGCTGCCTGGGCTGCTGGACCCAGTGCGGCGTGCGCCTGCGCGT
GGACACGGAAACCAACCGCATCCTGCGCGTGGCGGGCAACCCCTACCACCCGCTGGCCACCACGCAGCCGGCGCCCATGC
ACGCGCCGGTGCGCGAGGTCTACGCCCGGCTCGGCGGCGACAACGGCCTGGAAGGCCGCGCCACCTCGTGCGCGCGCGGC
TCGGCCATGCTGGAGCAGCTGACCAGCCCCTACCGCGTGCTGCAGCCGCTCAAGCGGGTCGGCCCGCGCGGCGCGGGCCA
GTGGCGCACCATTTCGTTCGAGCAGCTGGTGGAAGAAGTGTGCGAAGGCGGCGACCTGTTCGGCGAAGGCCATGTGGACG
GCCTGCGCGCCATCTACGACCCGGTCACGCCGCTGGATCCCGACAACCCCGAATACGGACCGCGCTCGAACCAGCTGCTG
TTCACCGACTCGGCCAACGAAGGCCGCACGCCGCTGATCCAGCGCTTCGCCGCGCAGTCGTTCGGCACCGTCAACGTATC
CAACCACGGCTCGTACTGCGGCCAGAGCTTCCGTGTCGGCACCGGCGCCGCGTTCGGCGACCTCAAGGGCATGCCGCACG
GCAAGCCGGACTGGACGCGCGCGCGCTTCGGCCTGTTCATCGGCACGGCGCCGGCGCAGTCGGGCAACCCGTTCCAGCGC
CAGGGCCGCCAGCTGGCCGAGGCGCGCGTGCGCGACGACGGCGCGGGCTTTCATTACGTGGTGGTCTCGCCGGTGCTGCC
CGCCAGCGCCAGCCTGGCGGCCGGCAGCGGCAACGAATGGCTGGCGGTCGACCCGGCCGGCGACCTGGCGCTGGTCATGG
GCATGATCCGCTGGATACTCGAGCACGACCGCTACGACGCCGCCATGCTGTCGCAGCCCGGTCCGGCCGCCATGGACGCG
GCCGGCGAAGCGGCCTGGACCAACGCCACCCACCTGGTCATCGACGCCCCCGGACACGCCCGGCACGGCAGCTGCCTGCG
CGGCGCCGACCTGGGCTGGCCGCGCACCGGCGCCGACCCGCAGGCCGAGGACGTCTACGTGGTGCAACGGCCCGACGGCA
CGCTGGCCCCGCATACCCATGCCGGCCCCGCCGCGCTGTTCGTCGAGCGCGACCTGCCCGCCGAAGGCGTGGCGCCCGGC
CTGGGCGGCGTGCGCGCCAGCTCGGCGCTGGCGCTGCTGCGCCGCGAGGCGCGCCGCATGACGCTGGACGAATACGCCCG
GCACAGCGGCGTGCCCGCCGCGCGGATCGCCGGGCTGGCCGAACGCTTCACCAGCCACGGCAAGCAGGCGGTGGCCGACG
CGCATGGCGGCACCATGAGCGGCGCCGGGTTCTACACGGCCTACGCCATCGCCATGCTCAACACCCTGGTGGGCAACCTC
AACGTGGCCGGCGGGCTGGTGCTCGACGGCGGCCCGTTCGCGCCCTACGGCAAGGGCCCGCGCTACGACATCGCCGGCTT
TGCCGGCCGCGTCGCGCCGCGCGGCGTCTCGCTGTCGCGCAACCGCTTCCCCTACGAGAAAAGCAGCGAGTACCGCCGCA
AGGCCGAAGCGGGCCAATCGCCCTACCCGGCGCGCTCGCCCTGGTATCCGGCGACCGGCGCGCTGAGCTCGGAAATGCTC
GCCTCGGCGCTGGCCGGCTACCCCTATCGCGCCAAGGTGTGGCTCAACCACATGAGCAACCCCGTCTACGCCATCGCGGG
GCTGAAGAACGTGATCGCCGACAAGCTGCGCGACCCCGGCCTGCTGCCGCTGTCCGTGTCGATCAATGCCTTCATCAACG
AAACCAACGCGCTGGCCGACTACATCGTGCCCGACACCATCACCTACGAAAGCTGGGGCGTGTCGGCGCCCTGGGCCGAC
GTGCAGGCCAAGGCCTCGACCGTGCGCTGGCCGGCCGTGGCGCCGCGCGTGGCGCGCACCGCGGACGGCGAGCCGGTGTG
CCTGGAGTCGTTCCTGATCGCGTGCGCCAAGCGGCTGGGCATGCCCGGCTTCGGCGCAGATGCGATCGCCGGCCGCGACG
GCCGGCGCCATGCGCTGGATACGGCCAGCGACTTCTTCCTGCGCGGCATGGCCAACATGGCCTATGCCGGCGGCGCGCCG
GTGGCCGAGGCCAGCGAGGACGACCTGGCCCTGACCGGCGTGGACCGCCACGCCGACCTGCTGCGGCGCACGCTGCACGA
AGACGAATGGCGCCGCGTGGCCCTGCTGATGAGCCGCGGCGGCCGCTTCGACGCGGCCGAGGACGTCTGGCGCGACGGCC
GCGTCCACCCGCCCTACCGCAAGCCGCTGCACGTCTGGAGCGAAGACCTGGCGCGCATGCGCCATGCGATGACCGGCGAG
CCCTACAGCGGCTGCCCCACCTGGTACCCGACCCGGCTGGCCGACGGCCGCGCCATGCGCGAGCAATATCCGCAGGCCGA
CTGGCCGTTCCTGCTGAGCTCGTTCAAATCCAACCTGATGAGCTCGATGTCGATCGGCGTGAGCCGGCTGCGCCAGGTGC
ACCCGCACAACCCGGTCTCGATCAGCCGCGCCGACGCCTCGCGCCTGGGCATCGGCAATGGCGACGCGGTGCGCATCGTC
ACGCCGGGCGGCGCGGTCACCGGGCTTGCGCTGGTGCGCGACGGCGTGCAGCCCGGCGCCATCGCCATCGAGCACGGCTA
CGGCCACACCGAACTGGGCGCGCGCGCCCATGTGGTCGACGGCCAGCCCATGCCGCACGACCCGGCGCTGGCCGCCGGCG
TCAATCTCAATGACCTGGGCTTTGGCGACGCCACCCGCGCGCTGCGCGACAAGGTGTGGATCGACTGGGTATCCGGCGCC
GCCGTGCGTCAGGGCCTGCCCGCGCGGCTAGAGAAGGCCTAG

Protein sequence :
MPKQHPTPDPNAPADARRRKLIARGGAVAGGMAAFAAGYGETVARAVKGLAQGSAGAPTADALRGNSLTPEFRIDPVTGA
LSAQPGQTVSPSSCLGCWTQCGVRLRVDTETNRILRVAGNPYHPLATTQPAPMHAPVREVYARLGGDNGLEGRATSCARG
SAMLEQLTSPYRVLQPLKRVGPRGAGQWRTISFEQLVEEVCEGGDLFGEGHVDGLRAIYDPVTPLDPDNPEYGPRSNQLL
FTDSANEGRTPLIQRFAAQSFGTVNVSNHGSYCGQSFRVGTGAAFGDLKGMPHGKPDWTRARFGLFIGTAPAQSGNPFQR
QGRQLAEARVRDDGAGFHYVVVSPVLPASASLAAGSGNEWLAVDPAGDLALVMGMIRWILEHDRYDAAMLSQPGPAAMDA
AGEAAWTNATHLVIDAPGHARHGSCLRGADLGWPRTGADPQAEDVYVVQRPDGTLAPHTHAGPAALFVERDLPAEGVAPG
LGGVRASSALALLRREARRMTLDEYARHSGVPAARIAGLAERFTSHGKQAVADAHGGTMSGAGFYTAYAIAMLNTLVGNL
NVAGGLVLDGGPFAPYGKGPRYDIAGFAGRVAPRGVSLSRNRFPYEKSSEYRRKAEAGQSPYPARSPWYPATGALSSEML
ASALAGYPYRAKVWLNHMSNPVYAIAGLKNVIADKLRDPGLLPLSVSINAFINETNALADYIVPDTITYESWGVSAPWAD
VQAKASTVRWPAVAPRVARTADGEPVCLESFLIACAKRLGMPGFGADAIAGRDGRRHALDTASDFFLRGMANMAYAGGAP
VAEASEDDLALTGVDRHADLLRRTLHEDEWRRVALLMSRGGRFDAAEDVWRDGRVHPPYRKPLHVWSEDLARMRHAMTGE
PYSGCPTWYPTRLADGRAMREQYPQADWPFLLSSFKSNLMSSMSIGVSRLRQVHPHNPVSISRADASRLGIGNGDAVRIV
TPGGAVTGLALVRDGVQPGAIAIEHGYGHTELGARAHVVDGQPMPHDPALAAGVNLNDLGFGDATRALRDKVWIDWVSGA
AVRQGLPARLEKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrA YP_216391.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 51
ttrA NP_460348.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 51
ttrA CAB37416.1 tetrathionate reductase subunit A (TtrA) Virulence SPI-2 Protein 0.0 51
ttrA NP_456144.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 50
ttrA NP_805054.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ttrA YP_006968278.1 tetrathionate reductase subunit A VFG0484 Protein 0.0 51