Gene Information

Name : dnaB (BN112_1596)
Accession : YP_006967664.1
Strain : Bordetella bronchiseptica 253
Genome accession: NC_019382
Putative virulence/resistance : Unknown
Product : DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1716852 - 1718225 bp
Length : 1374 bp
Strand : -
Note : -

DNA sequence :
ATGAATACCCCTGCCGATCCCCAGCTCGAATACCTGCGCGTGCCGCCGCACTCGATCGAGGCCGAGCAGTCGGTGCTGGG
CGGCCTGTTGCTGGACAACGCCGCCTGGGACCGCATCGCCGACGTCCTGGTCGAGGAAGACTTCTATCGCCACGACCACC
GCCTCATCTGGCACCATATCGCCCGGCTGATCGGCCTGGCCCGCCCGGCCGACGTCATCACCGTCAATGAATCGCTGGCC
AGCGCCGGCAAGTCCGAGGAGGTGGGCGGGCTGGCCTATCTCAACGCGCTGGCGCACAACACCCCGTCGGCGGCCAACAT
CCGCCGCTATGCCGAGATCGTGCGCGAGCGCGCCATGCTGCGCAAGCTGGTGTCGATCGCCGACGAGATCTCGGCGGCCG
CGCTCAATCCGCAAGGCAAGGAGGCCCGCCAGTTGCTGGACGAGGCCGAATCCAAGGTGTTCAAGATCGCCCAGGAAGGC
GAACGCGGCTCGGCGGGTTTCCAGGAAATCCAGCCGCTGCTGACCCAGGTGGTAGAACGGATCGACGAGCTGTATCACCG
CGAAAGCGAGTCCGATGTCACCGGCGTGCCGACCGGCTTCGCTGATCTGGACAAGATGACTTCCGGGCTGCAGGCCGGCG
ACCTGGTCATCGTGGCCGGCCGTCCGTCCATGGGCAAGACCTCGTTCTCGATGAACATCGGCGAGCACGTCGCCATCGAG
CAGGGGCTGCCGGTGGCGGTCTTCTCGATGGAAATGGGCGCGGTGCAGCTGGCCATGCGTATGCTGGGCTCGGTGGGCAT
GCTCGACCAGCATCGCATGCGTACCGGCAAGCTGGTCGCCGACGATTGGCCGCGCGTCACCCACGCGGTGCAACTGATGC
AGGACGCGCAGGTCTACATCGACGAAACGCCCGCGCTCAGCTCGATGGAAGTGCGCGCCCGCGCGCGGCGCCTGGCGCGC
CAGTGCGGGCAGCTGGGCCTGATCATCATCGACTACCTGCAGCTGATGTCGGCCAACAGCGCGGGCGAAAACCGCGCGAC
CGAAATCTCGGAAATCAGCCGCTCGCTCAAGGGCCTGGCCAAGGAGCTCAACTGTCCGCTGATCGCGCTGTCGCAGCTCA
ACCGCAGCCTGGAGCAGCGCCCCAACAAGCGGCCGGTAATGAGCGACCTGCGCGAATCCGGCGCCATCGAGCAGGACGCC
GACGTGATCCTGTTCATCTATCGCGACGAGGTCTACAACCCGGACTCGCCCGACAAGGGCTCGGCCGAGATCATCATCGG
CAAGCAGCGTAACGGTCCGATCGGCACCGTGCGCCTGACCTTCCAGGGGTCGAGCACGCGCTTTCTCAATTTCGCGCCCG
GCACCCAGTACTGA

Protein sequence :
MNTPADPQLEYLRVPPHSIEAEQSVLGGLLLDNAAWDRIADVLVEEDFYRHDHRLIWHHIARLIGLARPADVITVNESLA
SAGKSEEVGGLAYLNALAHNTPSAANIRRYAEIVRERAMLRKLVSIADEISAAALNPQGKEARQLLDEAESKVFKIAQEG
ERGSAGFQEIQPLLTQVVERIDELYHRESESDVTGVPTGFADLDKMTSGLQAGDLVIVAGRPSMGKTSFSMNIGEHVAIE
QGLPVAVFSMEMGAVQLAMRMLGSVGMLDQHRMRTGKLVADDWPRVTHAVQLMQDAQVYIDETPALSSMEVRARARRLAR
QCGQLGLIIIDYLQLMSANSAGENRATEISEISRSLKGLAKELNCPLIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDA
DVILFIYRDEVYNPDSPDKGSAEIIIGKQRNGPIGTVRLTFQGSSTRFLNFAPGTQY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-105 54
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 5e-89 48
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 3e-91 48
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 1e-91 48
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 1e-86 47
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 1e-89 46
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 1e-82 45
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 1e-82 45
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 1e-73 42