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Name : lysS (BN112_0121) Accession : YP_006966214.1 Strain : Bordetella bronchiseptica 253 Genome accession: NC_019382 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 102075 - 103595 bp Length : 1521 bp Strand : - Note : - DNA sequence : ATGACCGACCAATCGCCCGCCCCGACCGCCCAGGATGAAAACCGCTTGATCGCCGAACGGCGCGCCAAGCTGGCCAGACT GCGTGAAACCGGCGTTGCGTTTCCCAACGATTTCGTGCCCGATGCGCACGCCGCCGACCTGCACGCCAAGTACGACGGCC TGGACCAGGAGGCGCTGACGGCCGCGGCGGTCACGGTCAAGGTGGCCGGCCGCATGATGCTCAAGCGCGTCATGGGCAAG GCCAGCTTCGCCACGCTGCAGGACGGCAGCGGCCGCATCCAGATCTACCTCGAGCGCGGCACGCTCGGCGAAGAGGCCTA CGCCGCTTTCAAGCAATGGGACATCGGCGACATCATCGCCATCGAAGGACCGGTCTTCAAGACCAACAAGGGCGAGCTGT CGGTGCACGCCAACTCGGCGCGCCTGCTGTCGAAGTCGCTGCGCCCGCTGCCCGACAAGTTCCATGGCGTGGCCGACCAG GAGCTGCGCTACCGCCAGCGCTACGTCGACCTCATCATGACCGACGCCACTCGCCGCACCTTCGAGGCGCGCAGCAAGGC CGTCGGCGGCATCCGCCAGGCCATGCTCAATGCGGGCTTTCTCGAAGTCGAGACGCCGATGCTGCACCCGATTCCCGGTG GCGCGGCGGCCAAGCCCTTCGTGACCCACCACAATGCGCTGGACATGCAGATGTTCCTGCGCATCGCGCCCGAGCTTTAC CTCAAGCGCCTGATCGTCGGCGGCTTCGAGCGCGTGTTCGAAATCAACCGCAACTTCCGCAACGAGGGGGTGAGCCCGCG CCACAACCCCGAGTTCACCATGATGGAGTTCTACGCCGCGTACGCCGACTATCGCTGGCTGATGGACTTCACCGAGGACC TGATCCGCCAGGCCGCGATCGCGGCCACCGGCAGCGCCGTGCTCAGCTACCAGGACCGCGAGCTGGACCTGTCCCAGCCG TTCGACCGCCTGACGATCTGCGAAGCCATCCTGAAGTACGCCGAGGGCTATACCCAGGCGCAGCTCGACGACCCCGCGTT CGTGCGCGCCGAGCTCAGGAAACTGGGCGCCAACGTCGACGGCCCGCCGCTGGCGCGCGCCGGCCTGGGCGCGCTGCAAC TGGCGCTGTTCGAGGAAACCGCCGAAGCCAAGCTGTGGCGCCCCACGTACATCATCGACTACCCGGTCGAGGTCTCGCCC CTGGCGCGCGCCTCCGACACCCGCGACGGCATTACCGAGCGCTTCGAACTGTTCATCACCGGACGCGAAATCGCCAACGG CTTCTCCGAGCTCAACGATCCTGAAGACCAGGCCGAGCGCTTCCGCGCCCAGGTCGAGGCCAAGGACGCCGGCGACGAAG AGGCCATGTACTTCGACGCCGACTACATCCGCGCGCTCGAATACGGCATGCCCCCCACCGGCGGCTGCGGCATCGGCATC GACCGCCTGGTCATGCTGCTGACCGACAGCCCCAGCATCCGCGACGTTATCCTCTTCCCGCACCTGCGCCGGGAAGACTG A Protein sequence : MTDQSPAPTAQDENRLIAERRAKLARLRETGVAFPNDFVPDAHAADLHAKYDGLDQEALTAAAVTVKVAGRMMLKRVMGK ASFATLQDGSGRIQIYLERGTLGEEAYAAFKQWDIGDIIAIEGPVFKTNKGELSVHANSARLLSKSLRPLPDKFHGVADQ ELRYRQRYVDLIMTDATRRTFEARSKAVGGIRQAMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELY LKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAVLSYQDRELDLSQP FDRLTICEAILKYAEGYTQAQLDDPAFVRAELRKLGANVDGPPLARAGLGALQLALFEETAEAKLWRPTYIIDYPVEVSP LARASDTRDGITERFELFITGREIANGFSELNDPEDQAERFRAQVEAKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGI DRLVMLLTDSPSIRDVILFPHLRRED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 9e-130 | 58 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-75 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006966214.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 5e-130 | 58 |
