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Name : clpB (BN112_1096) Accession : YP_006967174.1 Strain : Bordetella bronchiseptica 253 Genome accession: NC_019382 Putative virulence/resistance : Virulence Product : ATP-dependent protease, ATPase subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1180194 - 1182791 bp Length : 2598 bp Strand : - Note : - DNA sequence : ATGCGATTCGACAAACTTACCACCAAGTTCCAGCAGGCCCTGGCGGACGCGCAAAGCCTGGCCGCCCGTAACGATCATCC CTATATCGAGCCCGTCCATGTGCTGGCGGCCCTGTTGGGCGACCCCGACAGCGGCGCGGCCAGCCTGCTGGCGCGCGCCG GCGTCGCCGTCAACCGCGTGCAGCCGGCCATCGACAGCGCCCTGAAAGGCCTGCCGCAGGTGCAGGGCGACGACAATGTC CAGGTCGGGCGCGAGCTGCAAAGCGTGCTCGTGCGCACCGACAAGGAGGCCGCGCGGCGCGGCGACACCTACATCGCCAG CGAGCTGTTCCTGCTGGCGCTGGCCGACGACAAGGGCGACGCCGGCCGCATCCTGCGCGAGGCGGGCCTGCAGAAGAAGG CCCTGGAAGCGGCCATCGACGCCGTGCGCGGCGGCGAGAACGTCTCGGGCGCGGAAGGCGAGTCCAACCGCGAGGCGCTG TCCAAGTACACGCTGGACCTCACCGAGCGCGCCCGTCAGGGCAAGCTGGATCCGGTCATCGGCCGCGACGACGAAATCCG CCGCACCATACAGATCCTGCAGCGCCGCACCAAGAACAACCCCGTGCTGATCGGCGAACCCGGCGTCGGCAAGACCGCCA TCGTCGAAGGGCTGGCGCAACGCATCGTCAACGACGAGGTGCCCGAGACGCTGCGCGGCAAGCGCGTGCTCTCGCTGGAC CTGGCGGCGCTGCTTGCCGGCGCCAAGTTCCGTGGCGAGTTCGAGGAACGCCTGAAGGCCGTGCTCAAGGAGCTGGCCCA GGACGACGGCCAGAACATCGTCTTCATCGACGAACTGCACACCATGGTCGGGGCGGGCAAGGCCGAAGGCGCCATGGACG CCGGCAACATGCTCAAGCCGGCGCTGGCGCGCGGCGAGCTGCATTGCATCGGCGCCACCACGCTGGACGAATACCGCAAG TACATCGAAAAGGATGCCGCGCTCGAGCGCCGCTTCCAGAAGGTGCTGGTCGGCGAGCCCGACGTGGAATCCACCATCGC CATCCTGCGCGGGCTGCAGGAGCGCTATGAGCTGCACCACGGCGTCGAGATCACCGATCCGGCCATCGTGGCGGCGGCCG AGCTGTCGCACCGCTACATCACCGACCGGTTCCTGCCCGACAAGGCAATCGACCTGATCGACGAGGCCGGCGCACGCATC CGCATGGAAATCGACTCCAAGCCCGAAGTGATGGACCGCCTGGACCGGCGCATCATCCAGCTCAAGATCGAACGCGAAGC CGTCAAGAAGGAAACCGACGACGCCTCCATGCGCCGCCTGGCCGTGATCGAGGAAGAGCTGGAGAAGCTGCAGCGCGAAT ACAACGACTACGAGGAAATCTGGAAAGCCGAGAAGGCCGCCGTGCAGGGCACGCAGGCCATCAAGGAAGAGATCGACCGC GTGCGCGCCGAGATGGCCGAACTGCAGCGCAAGGGCCAGTTCGACAAGCTGGCCGAGCTGCAATACGGCAAGCTGCCCGA GCTCGAGGCGCGCCTGAAGGCCGCCGACAGCGCCGAGCGTGAAGCCGGCGAATCCGACAGCGGCAAGCCGCGCCTGTTGC GCACCCAGGTGGGCGCCGAGGAAATCGCCGAGGTCGTCTCGCGCGCCACCGGCATCCCGGTGGCCAAGATGATGCAGGGC GAACGCGACAAGCTGCTGCGCATGGAGGATTTCCTGCACAAGCGCGTCGTGGGCCAGGACGAAGCCGTGCGGCTGGTTTC CGATGCCATCCGGCGTTCGCGCGCGGGCCTGGCGGATCCGTCGCGCCCTTACGGTTCGTTCCTGTTCCTCGGGCCCACCG GCGTGGGCAAGACCGAGCTGACCCGTGCCCTGGCGGATTTCCTGTTCGATTCCGAAGAGCACATGATCCGCATCGACATG AGCGAATTCATGGAGAAGCATTCCGTGGCGCGGCTGATCGGCGCGCCGCCGGGATACGTGGGCTACGAAGAAGGGGGCTA CCTGACCGAGGCGGTGCGCCGCAAGCCGTACAGCGTGATCCTGCTCGACGAGGTCGAAAAGGCGCATCCCGACGTGTTCA ACGTGCTGCTGCAGGTGCTCGACGACGGCCGCCTGACCGATGGCCAGGGGCGCACGGTGGACTTCCGCAACACGGTCATC GTCATGACGTCCAACCTTGGGTCGCAGCACATACAAAGCATGGCGGGCAAGCCGTACGAGGTCATCAAGGAAGTCGTGTG GGACGAGCTCAAGCATACGTTCCGCCCCGAGTTCCTGAACCGTATCGATGAAGTCGTGGTCTTCCATGGTCTGGAAGCCC AGCACATCGAGTCCATCGCCCGGATTCAGCTCAAGCGGCTGGGCGAGCGTCTCGAGAAGCAGGAGATGCGCCTGGACGTG TCCGATGCGGCGCTGGCGGAAATCGCACGCTCGGGCTTCGACCCGGTGTTCGGCGCCCGGCCGCTCAAGCGAGCCATCCA GCAGCAGATCGAGAACCCGGTCGCCAAGCTGATTCTCGAAGGCGTGTTCGGACCGCGCGATGTGGTGCCGGTCGACTGGC AGGACGGCAAGTTCGTCTTCACGCGCACTTTGCAATAA Protein sequence : MRFDKLTTKFQQALADAQSLAARNDHPYIEPVHVLAALLGDPDSGAASLLARAGVAVNRVQPAIDSALKGLPQVQGDDNV QVGRELQSVLVRTDKEAARRGDTYIASELFLLALADDKGDAGRILREAGLQKKALEAAIDAVRGGENVSGAEGESNREAL SKYTLDLTERARQGKLDPVIGRDDEIRRTIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLD LAALLAGAKFRGEFEERLKAVLKELAQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRK YIEKDAALERRFQKVLVGEPDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGARI RMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVIEEELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDR VRAEMAELQRKGQFDKLAELQYGKLPELEARLKAADSAEREAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQG ERDKLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRIDM SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVI VMTSNLGSQHIQSMAGKPYEVIKEVVWDELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRLDV SDAALAEIARSGFDPVFGARPLKRAIQQQIENPVAKLILEGVFGPRDVVPVDWQDGKFVFTRTLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-90 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-90 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_006967174.1 | ATP-dependent protease, ATPase subunit | VFG2076 | Protein | 3e-97 | 44 |
