Gene Information

Name : BN112_1003 (BN112_1003)
Accession : YP_006967083.1
Strain : Bordetella bronchiseptica 253
Genome accession: NC_019382
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1070555 - 1072189 bp
Length : 1635 bp
Strand : -
Note : -

DNA sequence :
ATGATTGAGAACACACCGAAGCAACGGGTGCTGGAGGTGTCCGGCCTGGCCATCCGCGCCGGCGCGCGGACACTGGTGCA
GGACGTCACGCTGAGCCTGGCCCAGGGAGAAATCCTGTGCCTGGTGGGCGAATCGGGGTCGGGCAAGTCGCTGACGGCGT
CGGCCGTCATGGGGCTGCTGCCGGGCAACCTGGGCGTGAGCGCCGGCAGCATCCGGCTCGATGGCGAAGACCTGACCGCG
GCGTCGCCGGCGCGCATGCAGGCGCTGCGCGGCGACCGCATGGCCATGGTGTTCCAGGAACCCATGACCTCGCTCAATCC
GCTGATGCGCGTGGGACGCCAGATCGCGGAGGTGTTGCAGGTGCACCGGCCGGACCTGGGCGCCGGGCAAGTGCGGGCGC
GGGTGCTGGAGCTGATGGGCGATGTGCACCTGCCCACCCCCGAGGCGCTCATGGACGCCTTCCCGCATCAATTGTCGGGC
GGGCAGCGCCAGCGCATCATGATCGCGATGGCGCTGGCGCTGGAGCCCGCGCTGATCATCGCCGACGAACCCACCACGGC
GCTCGACGTCACGACCCAGGCGCAGGTGCTCAAGCTGTTTCGCCAGTTGCTGGCCAAGCATTCGAGCGCGGTGCTGTTCA
TCACGCATGACTTCGATGTGGTGCGCGATATCGCCGACCACGTGGCCGTGATGCAGCTGGGCCGCATCGTCGAACAGGGG
CCGGCCGGGCAGGTGCTGGACGCGCCTCGCCACGACTACACCCGCAAGCTGCTGGCCGCGGTGCCGAGCGGCGTGCCCAA
GACGCAGCAGAACGCGTCGTCCGATGAACTTCTGTCGGTTAGCGGCCTGAACCTGGTTTATGAGTCGCGCGGCCTGCTGG
GCCCGGCGCGGCGCACGCATGCCGTCGCCGATGTCGGCTTCACGCTGAAAAAGGGCGAGACCCTGGGCGTTGTCGGCGAG
TCGGGCTCGGGCAAGTCGACCCTGGGGCGCTGCATCACGCGGGCGCACGCCCCCACGTCGGGCCGGATCGTCTTCGACGG
CGTGGACATCGCGGGGCTGTCGGGCAAGGCGCTGCGGGCGGTGCGCCGCCGCGTGCAGATGGTGTTCCAGGATCCCTACC
GGTCGCTGAACCCGCGCCGCAGGATTCTGCATGCCTTGATCGAAGGCCCGATCGAAAGCGGGGTGGACCGCAAGGCGGCC
TGCGCGCGCGCGGCCGAATTGATGGCCCTGGTGGGCTTGCCGGCCGACGGCCTGCAGCGTTATCCGCACCAGTTCTCGGG
CGGGCAGCGGCAACGCATCTGCATTGCGCGCGCCCTGGCGATGGAGCCCGACCTGATCGTCGCGGACGAGGCCGTGTCGG
CGCTGGACGTGTCGGTGCAGGCGCAGGTGCTGGAGCTGTTCGAAGATCTCCAGAAGCGGCTGGGATTCGCCATGATCTTC
ATTACCCACGACTTGCGCGTGGCCGCGCAGGTCTGCGACCGCATCGGCGTGATGCAGAAAGGGCGCCTGCTCGAGCTGGG
CCCGGTGCGGCAAGTCATCCATGCGCCCCAGCACCCCTATACCCGCCACTTGTTCGATTCGCTGCCCGGCCGCGTGGGCC
AGGCGGCGGAACCCGCCATGGAGCTACAGGCATGA

Protein sequence :
MIENTPKQRVLEVSGLAIRAGARTLVQDVTLSLAQGEILCLVGESGSGKSLTASAVMGLLPGNLGVSAGSIRLDGEDLTA
ASPARMQALRGDRMAMVFQEPMTSLNPLMRVGRQIAEVLQVHRPDLGAGQVRARVLELMGDVHLPTPEALMDAFPHQLSG
GQRQRIMIAMALALEPALIIADEPTTALDVTTQAQVLKLFRQLLAKHSSAVLFITHDFDVVRDIADHVAVMQLGRIVEQG
PAGQVLDAPRHDYTRKLLAAVPSGVPKTQQNASSDELLSVSGLNLVYESRGLLGPARRTHAVADVGFTLKKGETLGVVGE
SGSGKSTLGRCITRAHAPTSGRIVFDGVDIAGLSGKALRAVRRRVQMVFQDPYRSLNPRRRILHALIEGPIESGVDRKAA
CARAAELMALVGLPADGLQRYPHQFSGGQRQRICIARALAMEPDLIVADEAVSALDVSVQAQVLELFEDLQKRLGFAMIF
ITHDLRVAAQVCDRIGVMQKGRLLELGPVRQVIHAPQHPYTRHLFDSLPGRVGQAAEPAMELQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 5e-98 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-82 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-82 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-82 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-82 42