Gene Information

Name : yxdL (SaSA20_0819)
Accession : YP_006951226.1
Strain : Streptococcus agalactiae SA20-06
Genome accession: NC_019048
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 858823 - 859575 bp
Length : 753 bp
Strand : +
Note : -

DNA sequence : 
ATGTTATTAGAAATTAATCACTTAGAAAAAGTTTTTCGTACACGTTTTTCAAAAGAAGAGACAAGGGCTCTACAAGACGT
CGATTTTAAAGTTGAACAAGGGGAATTCATTGCTATTATGGGAGAGTCTGGTTCGGGAAAAACAACTCTGCTAAATATTT
TAGCTACTTTAGAAAAACCGACAAATGGACAAGTGATTTTAAATGGGGAAGATATTACGAAAATTAAAGAGGCAAAATTA
GCAAGTTTTCGTTTGAAAAATCTTGGTTTCGTCTTTCAGGACTTCAACCTTTTGGATACTCTCTCTGTAAGAGATAATAT
CTATCTTCCTTTAGTTCTTGATCGTAAACATTACAAAGAAATGGATCATCGTTTGTCAGAATTATCTTCTCATCTGAGAA
TTAATGACTTATTAGATAAGAGACCTTTCGAGCTCTCTGGTGGGCAAAAGCAACGTGTAGCGATTGCTCGTAGTTTGATA
ACCAACCCTCAAATTTTATTAGCAGATGAACCAACAGCAGCGTTAGATTACCGTAATTCAGAAGACTTGCTGAATTTATT
TGAAACTATTAACTTGGATGGACAAACTATTTTGATGGTAACCCATTCAGCAAATGCTGCTAGTCATGCCAAACGCGTTT
TATTTATCAAAGATGGACGTATTTTTCACCAACTTTATCGTGGTAATAAGAATAATAGCGAATTCAATAAAGATATTTCT
TTAACAATGTCTGCCATATTAGGGGGTGAATAA

Protein sequence : 
MLLEINHLEKVFRTRFSKEETRALQDVDFKVEQGEFIAIMGESGSGKTTLLNILATLEKPTNGQVILNGEDITKIKEAKL
ASFRLKNLGFVFQDFNLLDTLSVRDNIYLPLVLDRKHYKEMDHRLSELSSHLRINDLLDKRPFELSGGQKQRVAIARSLI
TNPQILLADEPTAALDYRNSEDLLNLFETINLDGQTILMVTHSANAASHAKRVLFIKDGRIFHQLYRGNKNNSEFNKDIS
LTMSAILGGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yxdL YP_006951226.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-39 45
yxdL YP_006951226.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-38 43
yxdL YP_006951226.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 7e-36 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yxdL YP_006951226.1 ABC transporter ATP-binding protein VFG2059 Protein 1e-15 44