Gene Information

Name : cdc19 (SaSA20_0790)
Accession : YP_006951197.1
Strain : Streptococcus agalactiae SA20-06
Genome accession: NC_019048
Putative virulence/resistance : Virulence
Product : Pyruvate kinase 1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 829410 - 830912 bp
Length : 1503 bp
Strand : +
Note : -

DNA sequence :
ATGAATAAACGCGTAAAAATCGTTGCAACACTTGGTCCTGCGGTAGAATTTCGTGGTGGTAAGAAGTTTGGTGAGTCTGG
ATACTGGGGTGAAAGCCTTGACGTAGAAGCTTCAGCAGAAAAAATTGCTCAATTGATTAAAGAAGGTGCTAACGTTTTCC
GTTTCAACTTCTCACATGGAGATCATGCTGAGCAAGGAGCTCGTATGGCTACTGTTCGTAAAGCAGAAGAGATTGCAGGA
CAAAAAGTTGGCTTCCTCCTTGATACTAAAGGACCTGAAATTCGTACAGAACTTTTTGAAGATGGTGCAGATTTCCATTC
ATATACAACAGGTACAAAATTACGTGTTGCTACTAAGCAAGGTATCAAATCAATTCCAGAAGTGATTGCATTGAATGTTG
CTGGTGGACTTGACATCTTTGATGACGTTGAAGTTGGTAAGCAAATCCTTGTTGATGATGGTAAACTAGGTCTTACTGTG
TTTGCAAAAGATAAAGACACTCGTGAATTTGAAGTAGTTGTTGAGAATGATGGTCTTATTGGTAAACAAAAAGGTGTAAA
CATCCCTTATACTAAAATTCCTTTCCCTGCACTTGCAGAACGCGATAATGCTGATATCCGTTTTGGACTTGAGCAAGGAC
TTAACTTTATTGCTATCTCATTTGTACGTACTGCTAAAGATGTTAATGAAGTTCGTGCTATTTGTGAAGAAACTGGCAAT
GGACACGTTAAGTTGTTTGCTAAAATTGAAAATCAACAAGGTATCGATAATATTGATGAGATTATCGAAGCAGCAGATGG
TATTATGATTGCTCGTGGTGATATGGGTATCGAAGTTCCATTTGAAATGGTTCCAGTTTACCAAAAAATGATCATTACTA
AAGTTAATGCAGCTGGTAAAGCAGTTATTACAGCAACAAATATGCTTGAAACAATGACTGATAAACCACGTGCGACTCGT
TCAGAAGTATCTGATGTCTTCAATGCTGTTATTGATGGTACTGATGCTACAATGCTTTCAGGTGAGTCAGCTAATGGTAA
ATACCCAGTTGAGTCAGTTCGTACAATGGCTACTATTGATAAAAATGCTCAAACATTACTCAATGAGTATGGTCGCTTAG
ACTCATCTGCATTCCCACGTAATAACAAAACTGATGTTATTGCATCTGCGGTTAAAGATGCAACACACTCAATGGATATC
AAACTTGTTGTAACAATTACTGAAACAGGTAATACAGCTCGTGCCATTTCTAAATTCCGTCCAGATGCAGACATTTTGGC
TGTTACATTTGATGAAAAAGTACAACGTTCATTGATGATTAACTGGGGCGTTATCCCTGTCCTTGCAGACAAACCAGCAT
CTACAGATGATATGTTTGAAGTTGCAGAACGTGTAGCACTTGAAGCAGGACTTGTTGAATCAGGCGATAATATCGTTATC
GTTGCAGGTGTTCCTGTAGGTACAGGTGGAACTAACACAATGCGTGTTCGTACTGTTAAATAA

Protein sequence :
MNKRVKIVATLGPAVEFRGGKKFGESGYWGESLDVEASAEKIAQLIKEGANVFRFNFSHGDHAEQGARMATVRKAEEIAG
QKVGFLLDTKGPEIRTELFEDGADFHSYTTGTKLRVATKQGIKSIPEVIALNVAGGLDIFDDVEVGKQILVDDGKLGLTV
FAKDKDTREFEVVVENDGLIGKQKGVNIPYTKIPFPALAERDNADIRFGLEQGLNFIAISFVRTAKDVNEVRAICEETGN
GHVKLFAKIENQQGIDNIDEIIEAADGIMIARGDMGIEVPFEMVPVYQKMIITKVNAAGKAVITATNMLETMTDKPRATR
SEVSDVFNAVIDGTDATMLSGESANGKYPVESVRTMATIDKNAQTLLNEYGRLDSSAFPRNNKTDVIASAVKDATHSMDI
KLVVTITETGNTARAISKFRPDADILAVTFDEKVQRSLMINWGVIPVLADKPASTDDMFEVAERVALEAGLVESGDNIVI
VAGVPVGTGGTNTMRVRTVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 5e-70 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-70 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-70 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 8e-71 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cdc19 YP_006951197.1 Pyruvate kinase 1 VFG0479 Protein 9e-71 44