Gene Information

Name : copB (FAES_pFAES01110)
Accession : YP_006941029.1
Strain :
Genome accession: NC_019012
Putative virulence/resistance : Resistance
Product : Cu2+-exporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.4
Position : 110513 - 112672 bp
Length : 2160 bp
Strand : -
Note : -

DNA sequence : 
ATGCCTTCTCAACCCACAAACCACGACGGCCACACTTCTTCTGAACATGCCCATCACGCACACGGTTCGCCCGATCATTC
GCATCATGCCGGTCACGTAACGGGCAGGACAGAGCCTGCTGCCGAGGCCCGGGCGCAACAGCACATCTCTCATGATGCCC
ATAGCGGCCCGGAACACCCAACCAGACACGAAAATCATGGTCACGATCACGGCGGTCCGCCGATGCGGGCTATGATTGTA
GACTTTTTGCGCCGGTTCTGGATTTGTCTGATCCTGTCTGTCCCGGTGGTTGGGCTGTCGATGATGTTTCAGGAGTTGAT
GGGCTACCAACTGGATTTCCCCTTCCGCGAACCGTTGGTGATAGGTCTGGCAACAGTCATCTATCTCTATGGCGGTTGGC
CGTTTTTATCGGGGATAGTCGGCGAGCTACGTACCCGACAACCCGGCATGATGACCCTGGTGGCAGTGGCGATCACGGCG
GCTTACGTATACAGCGTGGCTGTGTCGTTGGGCGTGCTACCAGGCATGGACTTTTTTTGGGAACTGGCGACGCTAATCGA
CATTATGCTGCTGGGGCATTACCTCGAAATGAAGTCGGTCGCAGGAGCCTCGCGTTCGCTGGAGTTGATCGTACAGATGC
TTCCCGCCGAAGCGCACAAAGTAGCCGGGGAACAAATCACGGACGTAAAAGTCGATACACTGACCCAGGGGGATACGGTG
CTGGTGCGGCCCGGTGAGCGCATCCCGACCGATGGAGAAGTCGTAGAGGGCCATAGTGCCGTGAACGAGAGTATGCTGAC
CGGCGAGAGCGTACCCGTAGAGAAACGGCAGCATGATAGTGTCATCGCCGGAGCCATCAACGGGGAGGGAGCGTTGACCA
TTCGAGTCACGCACAAGGGGGAGGACAGCTACCTCAACAAAGTGGTGCGGATGGTTGAGGAGGCACAGAATGCTAAATCG
AAAACCCAAACCCTGGCCGACCGGGCGGCTGGCTGGCTCACGCTCATCTCGCTGTCGGTGGGTCTGCTGACCCTGCTGGT
TTGGCTACTCGGCGGAAAAGACATAGCGTTTGCCGTTGAGCGCATGGTAACAGTAATGGTCACCGCCTGCCCTCACGCCT
TAGGCGTTGCTATTCCGCTGGTCGTCGCCATTTCAACCGCTATGTCGGCCCAACGCGGGCTGTTGATTCGTAACCGAACT
GCCTTCGAGGAAGCCCGCAAGATTACTGCGATGGTGTTTGATAAAACAGGTACATTGACAGAGGGGGCTTTTGGCGTAAC
TCGCGTACACGTACTGCGCGAAGGAACCGACGAAGCTACGTTGCTCAGTACGGCAGCCGCTCTGGAGCAATCATCGCAGC
ACCCTATCGCTCAGGGCATTACGCAGGAGGCCCGGCAACGTAGGTTGTCGCTGCCCGCCATCACCGATTTTCAGTCCATT
ACAGGCCGTGGTGTATCAGCAACCGTCGAGAGCAAGTCCGTGCAGGTGGTAAGTCCTGGCTATCTCAAGGAGCGGAACGT
ACCTATTCCCGCCGAGACGACAAGTAGCGAAGCCGAAACCATCGTGTACGTACTCATCGACGATCAACTGACCGGGTACG
TTGCGTTGGCGGACAAAATCCGCGCTGACTCTAAAGAAGCCGTACAACGGCTTCAGCAGGCAGGCATCAAGGTCTATATG
GCGACCGGCGACAACCAGAAAGTAGCCGATGCCGTCGCCAATGAGCTGGGCTTAGACGGTGTGTACGCCGAGGTGCTGCC
CGATCAGAAGGTGGCCGTTGTTAAAGACCTGCAAAGCAAGGGCCAATTCGTTGCCATGACCGGCGACGGGGTCAATGATG
CGCCCGCACTGGCGCAGGCGAACGTGGGCATTGCGGTTGGTTCTGGCACTGACGTAGCCGCCGAAACCGCCGACATCATT
CTGGTCAACAGCAAACCCACCGACATTACCAACCTGGTTGAGTTTGGCCGGGCGACGTACCGCAAGATGATTCAGAATTT
GTTTTGGGCAACAGGCTATAACGTTATTACTATCCCGCTTGCCGCTGGTGTGCTCTACCCTCGCTTCGTACTTAGCCCTG
CTATCGGTGCCGTACTCATGACTGCCAGTACCGTCATTGTGGCCCTGAACGCCCAATTGCTGAAGCGGAATTTACGCTGA

Protein sequence : 
MPSQPTNHDGHTSSEHAHHAHGSPDHSHHAGHVTGRTEPAAEARAQQHISHDAHSGPEHPTRHENHGHDHGGPPMRAMIV
DFLRRFWICLILSVPVVGLSMMFQELMGYQLDFPFREPLVIGLATVIYLYGGWPFLSGIVGELRTRQPGMMTLVAVAITA
AYVYSVAVSLGVLPGMDFFWELATLIDIMLLGHYLEMKSVAGASRSLELIVQMLPAEAHKVAGEQITDVKVDTLTQGDTV
LVRPGERIPTDGEVVEGHSAVNESMLTGESVPVEKRQHDSVIAGAINGEGALTIRVTHKGEDSYLNKVVRMVEEAQNAKS
KTQTLADRAAGWLTLISLSVGLLTLLVWLLGGKDIAFAVERMVTVMVTACPHALGVAIPLVVAISTAMSAQRGLLIRNRT
AFEEARKITAMVFDKTGTLTEGAFGVTRVHVLREGTDEATLLSTAAALEQSSQHPIAQGITQEARQRRLSLPAITDFQSI
TGRGVSATVESKSVQVVSPGYLKERNVPIPAETTSSEAETIVYVLIDDQLTGYVALADKIRADSKEAVQRLQQAGIKVYM
ATGDNQKVADAVANELGLDGVYAEVLPDQKVAVVKDLQSKGQFVAMTGDGVNDAPALAQANVGIAVGSGTDVAAETADII
LVNSKPTDITNLVEFGRATYRKMIQNLFWATGYNVITIPLAAGVLYPRFVLSPAIGAVLMTASTVIVALNAQLLKRNLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 2e-90 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
copB YP_006941029.1 Cu2+-exporting ATPase BAC0629 Protein 3e-157 55
copB YP_006941029.1 Cu2+-exporting ATPase BAC0079 Protein 3e-121 44
copB YP_006941029.1 Cu2+-exporting ATPase BAC0383 Protein 1e-98 41