Gene Information

Name : C694_02800 (C694_02800)
Accession : YP_006934466.1
Strain : Helicobacter pylori 26695
Genome accession: NC_018939
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein (cag22)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 574357 - 575163 bp
Length : 807 bp
Strand : -
Note : -

DNA sequence :
ATGAAACAAAGTTTGCGCGAACAAAAATTATTGAAAATTTTAGAAAATGATGTCTTGACGATTTTGGATAGTTTTTCTAA
TTATCTTTTTGAACTGAGAGAAGAGTTGGACTTCATAGAAGAAGAAATGGAAGGTGAAATCACCGAACAAAACCTTACCG
CTCTTTATGATTTTTCTAATTTCTTAGAAGACCATGTCAATGTATTTTATGAGAATGTTTTGAATATAGATGATGTCAAA
ACAGAACACCTTTATTCAGGTCTCATAGATAGTCTTAACGCTAATCTTCACTTTGTCAAGTCATTTCTCAGTAATCAGGA
TTTAGACTTCCGCTTTTTTAAGGAAATAAACGATGGGCAAGATCCCCAAAAAACATTATCAAGATTAATTCCTCTTCAAA
GTGGGAAAAATGATGCAAGCTCGTTTAAAGCCAATAATTCTTTTGTTTCATTAGTTTATGTTTATGTTTACTTCATGCTA
GAAACTATCATGCAGTCGTATAGGATTCTCAGATTGCTAGAAAAACCTATCAATAACAACATAAGCGAGGACATGCAGAA
CGATATAGAGAATTTTTTTGTTCAAGCGAATTTTTTAGAATACTATGTTCAGAACAAAATATACCCAACCAATCATGCCT
ATGACTTCACGCATTTGATCATGGACTCCATTATTCCTAATTGGATTCAAACTGATATGAGCGTTGAAGCTAAAAAGAAA
GAGCTTTTTGAAAAATATTTTCAAAACATTGATGAAGTAACAAACAAAATGCTCGATCAAAAAAATCAAAACAANAGTAA
CGATTGA

Protein sequence :
MKQSLREQKLLKILENDVLTILDSFSNYLFELREELDFIEEEMEGEITEQNLTALYDFSNFLEDHVNVFYENVLNIDDVK
TEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQDPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVYFML
ETIMQSYRILRLLEKPINNNISEDMQNDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQTDMSVEAKKK
ELFEKYFQNIDEVTNKMLDQKNQNXSND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0543 NP_207339.1 cag pathogenicity island protein (cag22) Virulence cag PAI Protein 3e-100 100
HP0543 BAD14014.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-99 98
HP0543 BAD13822.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-99 98
HP0543 BAD13931.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-99 98
HP0543 BAD13904.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-99 98
HP0543 BAD13959.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-99 98
cagF NP_223209.1 cag island protein Virulence cag PAI Protein 2e-98 98
cagF YP_005775743.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-99 97
HP0543 BAD13876.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-99 97
cagF YP_005777284.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-99 97
cagF YP_005779050.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-99 97
cagF AAN34516.1 putative outer membrane protein CagF Virulence cag PAI Protein 8e-98 97
HP0543 BAD14068.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-99 97
cagF AAN34518.1 putative outer membrane protein CagF Virulence cag PAI Protein 4e-98 97
HP0543 BAD13795.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-99 97
HP0543 BAD13849.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-99 97
cagF AAN34512.1 putative outer membrane protein CagF Virulence cag PAI Protein 3e-98 97
cagF AAN34513.1 putative outer membrane protein CagF Virulence cag PAI Protein 3e-98 96
cagF AAN34514.1 putative outer membrane protein CagF Virulence cag PAI Protein 1e-97 96
cagF YP_005774528.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-99 96
cag22 AAR03966.1 Cag22 Virulence cag PAI Protein 3e-99 96
cagF AAN34510.1 putative outer membrane protein CagF Virulence cag PAI Protein 2e-98 96
HP0543 BAD13986.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-97 96
cagF AAN34511.1 putative outer membrane protein CagF Virulence cag PAI Protein 1e-98 96
cagF AAC44701.1 CagF Virulence cag PAI Protein 1e-97 96
cagF AAN34515.1 putative outer membrane protein CagF Virulence cag PAI Protein 1e-98 96
cagF AAN34517.1 putative outer membrane protein CagF Virulence cag PAI Protein 1e-97 96
cag22 AAR03905.1 Cag22 Virulence cag PAI Protein 7e-99 96
HP0543 BAD14041.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-98 96
cagF AAN34509.1 putative outer membrane protein CagF Virulence cag PAI Protein 4e-97 96
cag22 AAR03935.1 Cag22 Virulence cag PAI Protein 3e-97 95
cagF YP_003728721.1 cag pathogenicity island protein F Virulence cag PAI Protein 1e-97 95
cag22 AAR03877.1 Cag22 Virulence cag PAI Protein 3e-97 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C694_02800 YP_006934466.1 cag pathogenicity island protein (cag22) VFG0302 Protein 1e-100 100