Gene Information

Name : C694_02755 (C694_02755)
Accession : YP_006934457.1
Strain : Helicobacter pylori 26695
Genome accession: NC_018939
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein S
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 566136 - 566726 bp
Length : 591 bp
Strand : -
Note : -

DNA sequence :
ATGAGTAATAACATGCGAAAACTCTTCTCAATGATTGCTGACTCAAAAGATAAGAAAGAAAAACTTATTGAGAGTTTGCA
AGAGAACGAACTTTTAAGCACTGATGAAAAAAAGAAAATCATAGATCAAATAAAAACCATGCATGATTTTTTCAAACAGA
TGCATACAAACAAGGGAGCGTTAGATAAGGTTCTAAGAAATTACATGAAAGATTATCGCGCTGTTATCAAAAGCATTGGT
GTTGATAAGTTTAAAAAGGTTTATCGATTGCTTGAGAGTGAGACTATGGAGCTGTTGCATGCCATTGCAGAGAATCCTAA
TTTCTTATTCTCCAAATTTGATCGATCAATTCTTGGAATATTTCTGCCTTTCTTCAGTAAGCCTATCATGTTCAAGATGA
GTATTAGAGAAATGGACTCGCAAATAGAATTGTATGGCACTAAGCTCCCACTATTGAAATTGTTTGTGATGACAGATGAA
GAAATGAATTTCTACGCTAATCTAAAAACCATTGAACAATATAACGACTATGTTAGGGATTTGCTGATGAAATTTGATCT
TGAAAAATACATGAAAGAAAAAGGAGTGTAA

Protein sequence :
MSNNMRKLFSMIADSKDKKEKLIESLQENELLSTDEKKKIIDQIKTMHDFFKQMHTNKGALDKVLRNYMKDYRAVIKSIG
VDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGIFLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDE
EMNFYANLKTIEQYNDYVRDLLMKFDLEKYMKEKGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0534 NP_207330.1 cag pathogenicity island protein (cag13) Virulence cag PAI Protein 2e-87 100
cag13 AAR03868.1 Cag13 Virulence cag PAI Protein 2e-87 99
HP0534 BAD14059.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-87 99
HP0534 BAD14005.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-87 99
HP0534 BAD13786.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-87 99
HP0534 BAD13895.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-87 99
HP0534 BAD13813.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-86 99
cagS YP_005774536.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-87 99
HP0534 BAD13840.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-87 99
cagS YP_005779057.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-87 99
HP0534 BAD14032.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-86 98
HP0534 BAD13950.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-86 98
HP0534 BAD13977.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-85 98
cagS NP_223200.1 cag island protein Virulence cag PAI Protein 1e-85 98
HP0534 BAD13867.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-86 98
cagS AAF80204.1 CagS Virulence cag PAI Protein 7e-87 98
cag13 AAR03957.1 Cag13 Virulence cag PAI Protein 5e-86 98
cagS YP_005775736.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-86 98
cag13 AAR03896.1 Cag13 Virulence cag PAI Protein 4e-86 98
cagS YP_005777277.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-86 98
cagS YP_003728731.1 cag pathogenicity island protein S Virulence cag PAI Protein 8e-86 97
cag13 AAR03926.1 Cag13 Virulence cag PAI Protein 3e-86 97
HP0534 BAD13922.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-85 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C694_02755 YP_006934457.1 cag pathogenicity island protein S VFG0293 Protein 7e-88 100