Gene Information

Name : C730_04220 (C730_04220)
Accession : YP_006936342.1
Strain : Helicobacter pylori Rif2
Genome accession: NC_018938
Putative virulence/resistance : Unknown
Product : homoserine dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.3
Position : 875201 - 876466 bp
Length : 1266 bp
Strand : +
Note : COG0460 Homoserine dehydrogenase

DNA sequence :
ATGAAAAAAAGATTGAATATAGGGCTTGTGGGTTTAGGGTGTGTGGGGAGTGCGGTCGCTAAAATCTTACAAGAAAATCA
AGAAATCATTAAAGACAGAGCCGGTGTGGGAATTGGCATTAAAAAAGCGGTGGTGCGAGATGTGAAAAAGCACAAAGGCT
ATCCTTTTGAAATCAGTAATGATTTAGAAAGCCTGATAGAAGATGAAGAAATTGATATTGTCGTGGAGCTTATGGGTGGG
GTGGAAGCGCCTTATCTTTTAGCTAAAAAAACTTTAGCCAAACAAAAAGCCTTCGTTACAGCCAATAAAGCCATGTTGGC
GTATCACCGCTATGAATTAGAGCAAACCGCTAAAAACACCCCCATAGGCTTTGAAGCGAGCGTGTGTGGGGGTATCCCTA
TTATCAAAGCTTTAAAAGACGGCTTGAGCGCTAATCACATCCTTTCTTTTAAAGGGATTTTAAACGGCACGAGCAATTAC
ATTTTAAGCCAGATGTTTAAAAATCAAGCGAGCTTTAAGGACGCTTTGAAAGACGCGCAACATTTAGGCTATGCGGAATT
GAACCCTGAATTTGACATTAAGGGCATTGATGCGGCGCACAAATTGTTGATTTTAGCGTCTTTAGCGTATGGCATTGATG
CGAAATTAGAAGAAATCTTGATTGAAGGCATTGAAAAAATAGAGCCAGACGACATGGAATTTGCAAAAGAATTTGGTTAT
AGCATTAAACTTTTAGGCATCGCTAAAAAACACCCAGATTGTATTGAATTAAGAGTGCATCCAAGCATGATTAAAAACGA
ATGCATGCTCTCTAAAGTGGATGGGGTGATGAACGCTATCAGCGTCATAGGGGATAAGGTGGGCGAGACTTTGTATTATG
GGGCTGGGGCTGGGGGAGAGCCTACCGCAAGCGCGGTCATTAGCGATATTATAGAAATCGCAAGGAAAAAAAGCTCTCTA
ATGCTGGGCTTTGAAACCCCTCAAAAACTCCCCCTAAAACCCAAAGAAGAAATCCAATGCGCTTATTATGCGCGCTTGTT
AGTGAGCGATGAAAAAGGGGTTTTTTCTCAAATCAGCGCGATTTTAGCTCAAAATGATATTTCGCTCAACAATGTCTTGC
AAAAAGAAATCTTGCATTCCAACAAGGCTAAAATCTTATTTTCCACGCACACCACCAACGAAAAGTCTATGCTGAACGCC
CTTAAAGAGCTTGAAAATTTACAAAGCGTGTTGGATACCCCCAAGATGATTCGTTTGGAAAATTGA

Protein sequence :
MKKRLNIGLVGLGCVGSAVAKILQENQEIIKDRAGVGIGIKKAVVRDVKKHKGYPFEISNDLESLIEDEEIDIVVELMGG
VEAPYLLAKKTLAKQKAFVTANKAMLAYHRYELEQTAKNTPIGFEASVCGGIPIIKALKDGLSANHILSFKGILNGTSNY
ILSQMFKNQASFKDALKDAQHLGYAELNPEFDIKGIDAAHKLLILASLAYGIDAKLEEILIEGIEKIEPDDMEFAKEFGY
SIKLLGIAKKHPDCIELRVHPSMIKNECMLSKVDGVMNAISVIGDKVGETLYYGAGAGGEPTASAVISDIIEIARKKSSL
MLGFETPQKLPLKPKEEIQCAYYARLLVSDEKGVFSQISAILAQNDISLNNVLQKEILHSNKAKILFSTHTTNEKSMLNA
LKELENLQSVLDTPKMIRLEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 3e-62 41
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 3e-62 41