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Name : C730_04220 (C730_04220) Accession : YP_006936342.1 Strain : Helicobacter pylori Rif2 Genome accession: NC_018938 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.1.1.3 Position : 875201 - 876466 bp Length : 1266 bp Strand : + Note : COG0460 Homoserine dehydrogenase DNA sequence : ATGAAAAAAAGATTGAATATAGGGCTTGTGGGTTTAGGGTGTGTGGGGAGTGCGGTCGCTAAAATCTTACAAGAAAATCA AGAAATCATTAAAGACAGAGCCGGTGTGGGAATTGGCATTAAAAAAGCGGTGGTGCGAGATGTGAAAAAGCACAAAGGCT ATCCTTTTGAAATCAGTAATGATTTAGAAAGCCTGATAGAAGATGAAGAAATTGATATTGTCGTGGAGCTTATGGGTGGG GTGGAAGCGCCTTATCTTTTAGCTAAAAAAACTTTAGCCAAACAAAAAGCCTTCGTTACAGCCAATAAAGCCATGTTGGC GTATCACCGCTATGAATTAGAGCAAACCGCTAAAAACACCCCCATAGGCTTTGAAGCGAGCGTGTGTGGGGGTATCCCTA TTATCAAAGCTTTAAAAGACGGCTTGAGCGCTAATCACATCCTTTCTTTTAAAGGGATTTTAAACGGCACGAGCAATTAC ATTTTAAGCCAGATGTTTAAAAATCAAGCGAGCTTTAAGGACGCTTTGAAAGACGCGCAACATTTAGGCTATGCGGAATT GAACCCTGAATTTGACATTAAGGGCATTGATGCGGCGCACAAATTGTTGATTTTAGCGTCTTTAGCGTATGGCATTGATG CGAAATTAGAAGAAATCTTGATTGAAGGCATTGAAAAAATAGAGCCAGACGACATGGAATTTGCAAAAGAATTTGGTTAT AGCATTAAACTTTTAGGCATCGCTAAAAAACACCCAGATTGTATTGAATTAAGAGTGCATCCAAGCATGATTAAAAACGA ATGCATGCTCTCTAAAGTGGATGGGGTGATGAACGCTATCAGCGTCATAGGGGATAAGGTGGGCGAGACTTTGTATTATG GGGCTGGGGCTGGGGGAGAGCCTACCGCAAGCGCGGTCATTAGCGATATTATAGAAATCGCAAGGAAAAAAAGCTCTCTA ATGCTGGGCTTTGAAACCCCTCAAAAACTCCCCCTAAAACCCAAAGAAGAAATCCAATGCGCTTATTATGCGCGCTTGTT AGTGAGCGATGAAAAAGGGGTTTTTTCTCAAATCAGCGCGATTTTAGCTCAAAATGATATTTCGCTCAACAATGTCTTGC AAAAAGAAATCTTGCATTCCAACAAGGCTAAAATCTTATTTTCCACGCACACCACCAACGAAAAGTCTATGCTGAACGCC CTTAAAGAGCTTGAAAATTTACAAAGCGTGTTGGATACCCCCAAGATGATTCGTTTGGAAAATTGA Protein sequence : MKKRLNIGLVGLGCVGSAVAKILQENQEIIKDRAGVGIGIKKAVVRDVKKHKGYPFEISNDLESLIEDEEIDIVVELMGG VEAPYLLAKKTLAKQKAFVTANKAMLAYHRYELEQTAKNTPIGFEASVCGGIPIIKALKDGLSANHILSFKGILNGTSNY ILSQMFKNQASFKDALKDAQHLGYAELNPEFDIKGIDAAHKLLILASLAYGIDAKLEEILIEGIEKIEPDDMEFAKEFGY SIKLLGIAKKHPDCIELRVHPSMIKNECMLSKVDGVMNAISVIGDKVGETLYYGAGAGGEPTASAVISDIIEIARKKSSL MLGFETPQKLPLKPKEEIQCAYYARLLVSDEKGVFSQISAILAQNDISLNNVLQKEILHSNKAKILFSTHTTNEKSMLNA LKELENLQSVLDTPKMIRLEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 3e-62 | 41 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 3e-62 | 41 |
