Gene Information

Name : C730_02815 (C730_02815)
Accession : YP_006936075.1
Strain : Helicobacter pylori Rif2
Genome accession: NC_018938
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein (cag25)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 578748 - 579095 bp
Length : 348 bp
Strand : -
Note : -

DNA sequence :

ATGAAATTTTTTACAAGAATCACTGACAGCTACAAGAAAGTTGTAGTAACTTTAGGGCTAGTGGTAACAACCAATCCTTT
AATGGCGGTCACCAGTCCTGCAGAAGGCGTTACTGAGACTAAAACTTTGGTTATTCAGATCATTTCTGTTCTAGCGATCG
TAGGGGGTTGCGCTTTAGGGGTCAAAGGCATAGCGGATATTTGGAAAATCTCTGATGATATCAAAAGAGGTCAGGCGACT
GTTTTTGCTTACGCGCAACCCATAGCTATGTTAGCGGTGGCAGGCGGTATTATCTATTTGAGCACTAAGTTTGGCTTCAA
TATTGGCGAGAGCGGAGGAGCTAGCTAA

Protein sequence :

MKFFTRITDSYKKVVVTLGLVVTTNPLMAVTSPAEGVTETKTLVIQIISVLAIVGGCALGVKGIADIWKISDDIKRGQAT
VFAYAQPIAMLAVAGGIIYLSTKFGFNIGESGGAS

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
HP0546	NP_207342.1	cag pathogenicity island protein (cag25)	Virulence	cag PAI	Protein	3e-41	100
cagC	NP_223212.1	cag island protein	Virulence	cag PAI	Protein	1e-40	99
cag25	AAR03908.1	Cag25	Virulence	cag PAI	Protein	8e-41	99
HP0546	BAD13907.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	3e-41	98
cag25	AAR03938.1	Cag25	Virulence	cag PAI	Protein	2e-40	98
HP0546	BAD13934.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	2e-41	98
cagC	AGC69805.1	cag pathogenicity island protein C	Virulence	cag PAI	Protein	2e-41	98
HP0546	BAD14017.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	3e-41	97
cagC	YP_003728718.1	cag pathogenicity island protein C	Virulence	cag PAI	Protein	4e-35	97
HP0546	BAD14071.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	4e-41	96
cagC	AAC44704.1	CagC	Virulence	cag PAI	Protein	3e-40	96
cagC	YP_005774525.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	1e-40	96
cag25	AAR03880.1	Cag25	Virulence	cag PAI	Protein	3e-41	96
cagC	YP_005779047.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	6e-41	96
HP0546	BAD13798.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	4e-41	96
cagC	YP_005775746.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	6e-41	95
HP0546	BAD13879.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	4e-41	95
cag25	AAR03969.1	Cag25	Virulence	cag PAI	Protein	2e-39	95
HP0546	BAD13852.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	3e-39	94
HP0546	BAD13825.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	2e-39	93
HP0546	BAD13989.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	1e-39	93
HP0546	BAD14044.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	2e-41	93
HP0546	BAD13962.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	6e-41	93
cagC	YP_005777287.1	cag pathogenicity island protein	Virulence	cag PAI	Protein	2e-39	92

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
C730_02815	YP_006936075.1	cag pathogenicity island protein (cag25)	VFG0305	Protein	8e-42	100