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Name : C730_08105 (C730_08105) Accession : YP_006937096.1 Strain : Helicobacter pylori Rif2 Genome accession: NC_018938 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 1645983 - 1646798 bp Length : 816 bp Strand : + Note : COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen DNA sequence : ATGAATGCATTCAAGCGTATTATTAGTGTGGGGGTAATTGCTTTAGGTTTGTTTAACCTTTTAGACGCCAAACACCACAA AGAGAAAAAAGAAAACCACAAAATCACTCGTGAGCTTAAAGTGGGCGCTAACCCCGTTCCGCATGCGCAAATCTTGCAAT CAGTCGTGGACGATTTGAAAGAGAAAGGGATCAAATTAGTGATCGTATCTTTTACGGATTATGTGTTGCCTAATTTAGCG CTCAATGACGGCTCTTTGGATGCGAATTACTTCCAGCACCGCCCTTATTTGGATCGGTTTAATTTGGACAGGAAAATGCA CCTTGTTGGTTTGGCCAATATCCATGTGGAGCCTTTAAGATTTTATTCTCAAAAAATCACAGATATTAAAAATCTTAAAA AGGGTTCAGTGATTGCTGTGCCAAATGATCCGGCCAATCAAGGTAGGGCGTTGATTTTACTCCATAAACAAGGCCTTATC GCCCTCAAAGACCCAAGCAATCTATACGCTACGGAGTTTGATATTGTCAAAAATCCTTACAATATCAAAATCAAGCCTTT AGAAGCCGCGTTATTGCCTAAGGTTTTAGGGGATGTGGATGGGGCTATCATAACAGGGAATTATGCCTTGCAAGCAAAAC TCACCGGAGCTTTATTTTCAGAAGATAAGGACTCGCCTTATGCCAATCTAATAGCCGCTCGTGAGGATAACGCGCAAGAT GAAGCCATAAAAACATTGATTGAAGCCTTACAAAGTGAAAAGACCAGGAAATTCATTTTGGATACCTATAAGGGGGCGAT TATCCCGGCTTTTTAA Protein sequence : MNAFKRIISVGVIALGLFNLLDAKHHKEKKENHKITRELKVGANPVPHAQILQSVVDDLKEKGIKLVIVSFTDYVLPNLA LNDGSLDANYFQHRPYLDRFNLDRKMHLVGLANIHVEPLRFYSQKITDIKNLKKGSVIAVPNDPANQGRALILLHKQGLI ALKDPSNLYATEFDIVKNPYNIKIKPLEAALLPKVLGDVDGAIITGNYALQAKLTGALFSEDKDSPYANLIAAREDNAQD EAIKTLIEALQSEKTRKFILDTYKGAIIPAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAAV_0786 | YP_003281709.1 | ABC transporter substrate-binding protein | Not tested | SaPIAv | Protein | 5e-35 | 41 |
| nlpA | AAW51766.1 | NlpA | Not tested | AGI-3 | Protein | 4e-36 | 41 |
