|
Name : C730_00690 (C730_00690) Accession : YP_006935670.1 Strain : Helicobacter pylori Rif2 Genome accession: NC_018938 Putative virulence/resistance : Unknown Product : L-lactate permease (lctP) Function : - COG functional category : - COG ID : - EC number : - Position : 150344 - 151993 bp Length : 1650 bp Strand : + Note : COG1620 L-lactate permease DNA sequence : ATGGAATTTTATCAAGTCTATGACCCATTAGGCCATATTTGGCTGAGCGCTTTAGTCGCACTTTCGCCTATTGCGCTCTT TTTTGTCTCTCTTATTGTCTTTAAACTTAAAGGGTATAGCGCTGGGTTTTTAAGCTTATTGCTTTCAATCATTATTGCGT TATTTGTGTATAAAATGCCCGCTCAAATGGTGAGCGCGAGTTTTTTCTATGGCTTTCTTTATGGCTTGTGGCCGATCGCT TGGATTGTGATCGCTGCGATTTTTCTTTACAACCTTTCAGTGAAATCCGGGTATTTTGAAATTTTAAAAGAAAGCATTTT AACCCTAACGCCAGATCACCGCATTTTAGTGATTTTGATTGGCTTTTGTTTTGGCTCGTTTTTAGAAGGAGCGATCGGCT TTGGAGGCCCGGTAGCGATCACAGCGGCGATTTTAGTCGGCCTTGGGCTAAACCCCTTATACGCTGCCGGATTGTGCCTG ATCGCTAACACCGCTCCTGTAGCTTTTGGCGCGGTGGGCATTCCTATTACGGCAATGGCTAGCGTGGTGGGTATCCCTGA GTTAGAGATTTCTCAAATGGTGGGCAGGGTGTTACCCATTTTTTCCATTGGTATTCCTTTTTTCATCGTGTTTTTAATGG ATGGTTTTAGAGGGATTAGAGAGACTTTTCCTGCAGTGGCTGTTACCGGGTTTAGTTTCGCTATCGCACAATTTTTAAGC TCTAATTATCTAGGGCCGCAACTCCCGGATATTATTTCAGCCTTAGTGTCATTGATCGCTACCACTTTGTTTTTAAAATT CTGGCAGCCCAAACGCATTTTCACCAGCAATGGCAAAGAGCCCACGATAAACACAGAAAAACACCATATTTGTAAGGTGG TTGTGGCGTGGATGCCTTTTGTGTTGCTCACTATTACGATTATCATATGGACGCAACCTTGGTTTAAAGCGCTCTTTAAA GAAGGCGGGGCTTTGGCGTTTTCTAGCTTTGCGTTTGAATTCAGTTCTATCAGTCAAAAGATTTTTAAAACCGTTCCCAT TGTTACTGAAGCGACTAATTTTCCTGTCGTGTTCAAACTCCCTTTGATTTTAACGACAGGCACTTCCATTTTTTTAGCCG CCATTTTGAGCGTGTTTTTGTTGCGCGTGAAAATCAGCGATGCGATAGGGGTGTTTGGGGCCACTTTAAAAGAAATGCGT TTGCCGATTTTAACCATTGGCGTGGTTTTAGCGTTTGCATATGTGGCTAATTATAGCGGCATGAGCGCTACGCTCGCTTT AGCGTTAGCGGATACCGGGCATGTTTTCACTTTCTTTTCGCCTGTGGTAGGTTGGCTTGGGGTGTTTTTAACCGGAAGCG ATACGAGCTCTAATCTTTTATTTGGCTCTTTGCAAATGCTCATCGCCACGCAGCTTGGCTTGCCTGAAGTGCTTTTCTTA GCGGCAAACACTTCAGGGGGTGTTGTGGGTAAAATGATAAGCCCTCAAAGTATCGCTATCGCTTGCGCGGCGGTGGGGTT AGTGGGGAAAGAGAGCGAATTGTTCAGATTTACAGTAAAATACTCCATCGTTTTGGCAATCATTATGGGGATTGTCTTCA CTCTTATTGCTTATGTCTTCCCCTTTATTATCCCCATCATTCCTAAATAA Protein sequence : MEFYQVYDPLGHIWLSALVALSPIALFFVSLIVFKLKGYSAGFLSLLLSIIIALFVYKMPAQMVSASFFYGFLYGLWPIA WIVIAAIFLYNLSVKSGYFEILKESILTLTPDHRILVILIGFCFGSFLEGAIGFGGPVAITAAILVGLGLNPLYAAGLCL IANTAPVAFGAVGIPITAMASVVGIPELEISQMVGRVLPIFSIGIPFFIVFLMDGFRGIRETFPAVAVTGFSFAIAQFLS SNYLGPQLPDIISALVSLIATTLFLKFWQPKRIFTSNGKEPTINTEKHHICKVVVAWMPFVLLTITIIIWTQPWFKALFK EGGALAFSSFAFEFSSISQKIFKTVPIVTEATNFPVVFKLPLILTTGTSIFLAAILSVFLLRVKISDAIGVFGATLKEMR LPILTIGVVLAFAYVANYSGMSATLALALADTGHVFTFFSPVVGWLGVFLTGSDTSSNLLFGSLQMLIATQLGLPEVLFL AANTSGGVVGKMISPQSIAIACAAVGLVGKESELFRFTVKYSIVLAIIMGIVFTLIAYVFPFIIPIIPK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcA | CAE85240.1 | GlcA protein, putative glycolate permease | Not tested | PAI V 536 | Protein | 1e-125 | 55 |
